Orcinus orca (killer whale): 101288950
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Entry
101288950 CDS
T05247
Symbol
CDH4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101288950 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oor04515
]
101288950 (CDH4)
Cell adhesion molecules [BR:
oor04515
]
Cadherins
Major cadherins
101288950 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cytomega_TRL10
Stevor
Motif
Other DBs
NCBI-GeneID:
101288950
NCBI-ProteinID:
XP_033266114
LinkDB
All DBs
Position
16:complement(2553566..3110463)
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AA seq
914 aa
AA seq
DB search
MTVGSGVLLVLLSLSGALRAHNGDLTARETCKAGFSEEDYTALISQNILEGEKVLKVKFS
SCLGTKGTHYETDSMDFKVGADGTVFATRELQIPSEQVAFTVTAWDRQMAERWDAAVRLL
VAQTSPTQSGHKKGKKSAPLDPVQPPNDTLLPWPQHQSSNGLRRQKRDWVIPPINVPENS
RGPFPQQLVRIRSDKDSDIPIRYSITGVGADQPPVEVFSIDSMSGRMYVTRPMDREERAS
YHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFLSQLYNGSVDEGSRPGTYVMTVTAS
DADDGTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQAT
DMEGNLNYGLSNTATAIITVTDVNDNPPEFTASTYAGEVPENRVEMVVANLTVMDRDQPH
SPNWNAVYRIISGDPSGHFSVRTDPVTNEGMVTVVKAVDYELNRAFMLTVMVSNQAPLAS
GIQMSFQSTAGVTISVMDINEAPYFPSNHKLIRLEEGVPTGTVLTTFSAVDPDRFMQQAV
RYSKLLDPANWLHINATNGQISTAAVLDRESPYIRNNVYEATFLAADNGIPPASGTGTLQ
IYLIDINDNAPELLPREAQICEKPSLNTINITAADADVDPNIGPYVFELPFVPASVRKNW
TITRLNGDYAQLSLRILYLEAGVYDVPIVVTDSGNPPLSNTSIIKVKVCPCDENGDCTTM
GAVAAAGLGTGAIVAILICIIVLLTMVLLFVVWMRRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPEAMEHVLSKAPGVRRVDERPVGAEPQYPARPVVPHPGDI
GDFISEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLDSSSSGDQDYEYLNDWGPR
FRKLADMYGGGQED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgggctccggcgtgctcctcgtgctgctctcgctctccggcgcgctccgggcc
cacaatggagatcttacagccagggagacctgcaaagctggattctctgaagaagattac
acggcattaatctcccaaaatattctggaaggagagaaggtcctcaaagtcaagttcagc
agctgcctggggaccaaggggacacactatgagaccgacagcatggacttcaaagtcggg
gctgacgggacagtcttcgccacccgggagctgcagatcccctccgagcaggtggccttc
accgtgaccgcgtgggaccgccagatggccgagcgctgggacgccgcggtacggctgctg
gtggcccagacctcacccacgcagtccggacacaagaaaggaaagaagagtgcacccctg
gaccctgtccagccgccaaatgacacactgttgccgtggccacagcatcagagctccaat
gggctgaggcggcagaaacgggactgggtcatcccgcccatcaacgtgccagaaaactcc
cgcgggcccttcccgcagcagctggtgaggatccggtccgacaaagacagcgacatcccc
atccgctacagcatcacgggcgtgggcgccgaccagcccccggtggaggtcttcagcatc
gactccatgtctggccggatgtatgtcacacggcccatggaccgggaggagcgagcctcc
taccacctccgagcccacgccgtggacatgaacggcaacaaggtggagaatcccatcgac
ctgtacatctacgtgattgacatgaacgacaaccgccccgagttcctcagccagctgtac
aacggctccgtggacgaaggctccaggccaggcacctacgtgatgaccgtcacagccagc
gacgctgacgacggcaccacggccaatgggatggtgcgctaccggatcgtgacccagacc
ccgcagagcccctcccagaacatgttcaccatcaacagcgagacaggggacatcgtgacg
gtggcggccggcctggaccgagagaaagttcagcagtacacagtcattgttcaagcgaca
gacatggaaggaaacctgaactatggcctgtccaacacggccacagccatcatcacggtg
acagacgtgaacgacaacccgcccgagttcactgccagcacgtacgcaggggaagtcccc
gaaaaccgggtggagatggtggtcgcaaacctcactgtgatggaccgagatcagccccac
tccccgaactggaacgctgtctaccgcatcatcagcggggacccctcgggccacttcagc
gtccgcacggaccccgtcaccaacgagggcatggtcaccgtggtgaaggcggtcgactat
gagctgaacagagcgttcatgctgaccgtgatggtgtccaaccaggcgcccctggccagc
gggatccagatgtccttccagtccacggcgggggtgaccatctcagtcatggacatcaac
gaggccccctacttcccctcgaaccacaagctgatccgcctggaggagggcgtgcccacc
ggcaccgtgctaaccacgttttcggcagtggaccctgaccggttcatgcagcaggccgtg
agatactcaaagctgttggacccagcgaactggctgcacattaacgccaccaacggtcag
atcagcacggcggccgtcctcgaccgcgagtctccctacatcagaaacaacgtctatgag
gccaccttcctggcagcggacaacgggatccctccggccagcggcaccggcaccctgcag
atctacctcatcgacatcaatgacaacgcccccgagctgctgcccagggaggcgcagatc
tgcgagaagcccagcctgaacaccatcaacatcacggcggctgacgcggacgtcgacccc
aacatcggcccctatgtcttcgagctgcccttcgttccagcgagcgtgcggaagaactgg
accatcacccgcctcaatggtgactacgcccagctcagcctgcgcatcctgtacctggag
gccggagtgtacgacgtccccatcgtcgtcacggactcggggaacccgcccctgtccaat
acgtccatcatcaaagtcaaggtgtgcccgtgcgacgagaatggcgactgcaccaccatg
ggcgcggtggcggcagccgggctgggcacgggcgccatcgtggccatcctcatctgcatc
atcgtcctgctcaccatggtcctgctgttcgtcgtgtggatgaggcggcgggagaaggag
cggcacacgaagcagctgctcatcgaccccgaggacgacgtgcgcgacaacatcctcaag
tacgacgaggaagggggcggcgaggaggaccaggactacgacctcagccagctgcagcag
ccggaggccatggagcacgtgctgagcaaggcccccggggtgcggcgggtggacgagcgg
ccggtgggcgccgagccccagtacccggcccggccggtggtgccccacccaggagacatc
ggggacttcatcagcgagggactccgcgcagccgacaacgaccccacggcgccgccctat
gactcgctgctggtcttcgactacgagggcagcgggtccaccgcgggctccgtcagctcc
ctggactcatccagctccggggaccaggactacgaatacctgaacgactgggggcccagg
ttcaggaagctggcagacatgtacggcggcggccaggaggactaa
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