Orcinus orca (killer whale): 101289059
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Entry
101289059 CDS
T05247
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04082
Neuroactive ligand signaling
oor04721
Synaptic vesicle cycle
oor04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101289059 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101289059 (SLC6A4)
04721 Synaptic vesicle cycle
101289059 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oor02000
]
101289059 (SLC6A4)
Transporters [BR:
oor02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101289059 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101289059
NCBI-ProteinID:
XP_004267144
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Position
19:complement(6266727..6303950)
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AA seq
629 aa
AA seq
DB search
METTPLNSQKELTAYVDGEDCQGNSVLQRGVPVPGDKAESSQISNGYSAVPSPSAEDTQH
SIPAATTTLVAEVHPGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPY
TIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMA
WALYYLISSFAAQLPWTSCKNSWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHVLQIHR
SKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGAT
LPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDA
LVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAST
FFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLSVVITCFFGSLITL
TFGGAYVVKLLEEFATGPAVLTVALIEAIAVYWFYGINQFCSDVKEMLGFSPGWFWRICW
VAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPMYITYRLIITP
GTLKERLIKGITPETPTEIPCGDIHLNAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttaaattcccagaaggagctaacagcatatgtggatggagaagac
tgtcaaggaaacagtgttctacagaggggtgtccctgtccctggggataaggcggagtcc
agccaaatctcgaatgggtactcagcagttccaagccccagtgcagaagacactcagcat
tccatcccggctgccaccaccaccctagtggctgaggttcatccaggggaacgggagacc
tggggcaagaaggtggatttcctcctctccgtcattggctatgctgtggacctgggcaac
gtctggcgctttccctacatctgttaccagaatggaggtggggcattcctcctcccctac
actatcatggccgttttcggggggatcccgctcttctacatggagctcgcgctgggccag
taccaccgaaatggatgcatttcgatatggaggaaaatctgcccgattttcaaagggatc
ggttacgccatctgcatcattgccttttacatcgcctcctactacaacaccatcatggcc
tgggcgctctactacctcatctcctcttttgcggcccagctgccctggaccagctgtaag
aactcctggaacactggcaactgcaccaactacttctccgaggacaacgtcacctggaca
ctccactcaacatcccctgcagaagaattttatacgcgccacgtcctgcagatccaccgg
tcaaaggggctccaggacctggggggcatcagctggcagcttgccctctgcatcatgctg
atcttcactgttatctactttagcatctggaaaggtgtcaaaacatctggcaaggtggtt
tgggtaacagccaccttcccttacatcatcctttcgatcctgctggtgaggggggccacc
ctccccggagcctggaggggagttctcttctatttgaaacccaactggcagaaactcctg
gagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggtcctggcttt
ggggtcctgctggctttcgcgagctacaacaaattcaacaacaactgttaccaagacgcc
ttggtgaccagcgtggtgaattgcatgacgagcttcgtttcaggatttgtcatcttcaca
gtgctggggtatatggctgagatgaggaacgaagatgtgtctgaggtggccaaagatgca
ggccccagcctgctcttcatcacatatgcggaagccatagccaacatgccggcatccacg
ttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacatttgca
ggcttggagggggtgatcacagccgtgctggatgagtttccacacatctggtctaagcgc
cgggagtggtttgtgctcagcgtggtcattacctgcttctttggatccctcatcaccctg
acttttggaggggcctatgtggtgaagctgctggaggagtttgccacgggacccgcagtg
ctcactgttgccctgatagaagcaattgctgtgtattggttctatggcatcaatcagttc
tgcagtgacgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgctgg
gtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccacca
cagctacgactttttcagtataattatcctcagtggagcatcatcctgggttactgcata
ggaacctcatctttcatctgcatcccgatgtatataacttatcggctgatcatcactcca
gggacacttaaggagcgtcttattaaaggtatcactccagaaacaccgacagaaattccc
tgtggggatatccacttgaacgctgtgtaa
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