Orcinus orca (killer whale): 101289082
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Entry
101289082 CDS
T05247
Symbol
NECTIN1
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03266
Virion - Herpesvirus
oor04514
Cell adhesion molecule (CAM) interaction
oor04517
IgSF CAM signaling
oor04520
Adherens junction
oor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
101289082 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101289082 (NECTIN1)
04517 IgSF CAM signaling
101289082 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101289082 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101289082 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oor04515
]
101289082 (NECTIN1)
04090 CD molecules [BR:
oor04090
]
101289082 (NECTIN1)
Cell adhesion molecules [BR:
oor04515
]
Immunoglobulin superfamily
Nectin family
101289082 (NECTIN1)
CD molecules [BR:
oor04090
]
Proteins
101289082 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Ig_PVRIG
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
101289082
NCBI-ProteinID:
XP_004273339
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All DBs
Position
8:complement(96079797..96148673)
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AA seq
517 aa
AA seq
DB search
MARMGLAGAAGLWWGLALGLTAFFLPGAHTQVVQVNDSMYGFIGTDVVLHCSFANPLPGV
KITQVTWQKATNGSKQNVAIYNPAMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEG
VYICEFATFPAGNRESQLNLTVMAKPTNWIEGAQAVLRARKGQDDKILVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFRESLT
LNVQYEPEVTIEGFDGNWYLQRMDVKLKCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPINYSLAGTYVCEATNSIGTRSGQVEVNITEFPYTPSPPEHGRRAGPVPTAIIGGV
VGSIMLVLIVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPE
DSDDEKKAGPLGGSSYEEEEEEEEGGGGERKAGGPHPKYDEDAKRPYFTVDEAEARQDGC
YGDRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggactctggtggggactcgctctcggcttg
accgccttcttcctcccaggcgcccacacccaggtggtccaggtgaacgactccatgtac
ggtttcatcggcacggacgtggtgctgcactgcagcttcgccaacccgctgcccggcgtg
aagatcacccaggtcacgtggcagaaggccaccaatggctccaagcagaacgtggccatc
tacaacccggccatgggcgtctcggtgctggccccctaccgcgagcgcgtggagttccta
cggccctccttcacagatggtaccattcgcctttcccgcctggagctggaggacgagggc
gtctacatctgcgagtttgccaccttccctgctggcaatcgagagagccagctcaacctc
actgtgatggccaaacccaccaactggatagagggcgcccaggcagtgcttcgagccagg
aaggggcaggatgacaagatcctggtggccacctgcacctcggccaatgggaagcctccc
agtgtggtgtcctgggaaacgcggctgaagggtgaggcggagtaccaggagatccggaac
cccaatggcacggtgaccgtcatcagccgctaccgcctggtgcccagccgggaagcccac
cagcagtcccttgcctgcatcgtcaactaccacatggaccgcttccgggaaagcctcacc
ctcaatgtgcagtacgagcccgaggtgaccatcgaggggtttgatgggaactggtacctg
cagcggatggatgtgaagctcaagtgcaaagctgatgccaaccccccagccaccgagtac
cactggaccacgctgaatggctccctccccaagggtgtggaggcccagaacagaactctc
ttcttcaggggacctatcaactacagcctggcaggaacctacgtctgtgaggccaccaac
tccatcggcacccgctcgggccaggtggaggtcaatatcacagagttcccctacaccccg
tctcctcccgaacacgggcgtcgcgccgggccggtgcccacggccatcattgggggcgtg
gtggggagcatcatgctggtgctgattgtggtcggcgggatcgtggtggccctgcgccgg
cgccgccacaccttcaagggcgactacagcaccaagaagcacgtgtacggcaatggctac
agcaaggccggcatcccccagcaccacccgcccatggcccagaacctgcagtaccctgag
gactcggacgacgagaagaaagccgggcccctgggcggcagcagctacgaggaggaagag
gaggaggaggaaggcggagggggcgagcgcaaggcgggcggccctcaccccaaatacgac
gaggacgccaagcggccctacttcacggtggacgaggcggaggcccgtcaggacggctgc
tacggggaccggactctgggctaccagtacgacccggagcagctggacttggcggaaaac
atggtttctcagaacgacgggtctttcatttccaagaaggagtggtacgtgtag
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