Orcinus orca (killer whale): 101289133
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Entry
101289133 CDS
T05247
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04360
Axon guidance
oor04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101289133 (SLIT2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101289133 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oor00536
]
101289133 (SLIT2)
Glycosaminoglycan binding proteins [BR:
oor00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101289133 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRR_9
LRRNT
LRR_1
LRRCT
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
101289133
NCBI-ProteinID:
XP_012387195
LinkDB
All DBs
Position
4:complement(107383390..107769498)
Genome browser
AA seq
1530 aa
AA seq
DB search
MRGVGWQTLSLSLGLVLAILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRSTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAVPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLAKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHK
MFKGLESLKTLMLRSNRISCVGNDSFTGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPTECTCLDTVVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV
PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPGYIGEHCDIDFDDC
QDNKCKNGAHCTDAVNSYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRI
NEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYK
GDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGS
PKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINSELQD
FRKVPMQTGILPGCEPCHKKVCAHGTCQPSTQSGFTCECQEGWTGPLCDQRTNDPCLGNK
CVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECS
SGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPLRSKR
RKYTFECTDGSSFVDEVEKVVKCGCTHCAS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgtgggctggcagacgctgtccctgtcgctggggttagtgctggcgatcctg
aacaaggtggcgccgcaagcgtgtccggcgcagtgctcctgctccgggagcacagtggac
tgtcacgggctggcgctgcgcagtgtgcccaggaacatcccccgcagcactgagagactg
gatttgaatggaaataacatcacacggattactaaaacagattttgctggtcttcgacac
ctaagagttcttcagcttatggagaataagattagcaccattgaaagaggagcattccag
gatcttaaagaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttcgaagctatacagacttgacctcagtgaaaaccaaattcag
gcagttccaaggaaagctttccgtggggcagttgatattaaaaatctgcaactggattac
aaccagatcagctgtattgaagatggggcatttagggctctccgggacctggaggtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgactccattcgaacaacctgtattgtgactgccacctggcctggctc
tcggactggctacgccaaaggcctcgggtgggcctctacactcagtgtatggggccatcc
cacctaaggggccataacgtagctgaggttcaaaaacgagaatttgtctgcagtggtcac
caatcatttatggcgccgtcttgcagtgttttgcattgtccagctgcttgtacctgtagc
aacaatatcgtagactgccgtgggaaaggtctcactgagatccccacaaatctgccagag
actatcacggaaatacgtttggaacagaactcaatcaaggtcattcctcctggagctttc
tcaccatataaaaagcttagaagaatcgacctgagcaataatcagatctctgagctagca
ccagatgctttccaaggactacgctctctgaattcacttgtcctctatggaaataaaatc
acagaactcccaaaaagtttatttgaaggactgttttccttacagctactattattgaat
gccaacaagataaactgccttcgggtagatgcttttcaggatctgcacaacctgaacctc
ctctccttatatgacaacaagcttcagaccatcgccaaggggaccttttcacctctccgt
gccattcaaaccatgcatttggcccagaacccctttatttgtgactgccatctcaagtgg
ctggcggattatcttcataccaacccaatcgagaccagtggtgcccgctgcaccagcccc
cggcgtctggcaaataaaagaatcggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggtacagaagattatcgatcaaaattaagtggggactgc
tttgccgatctggcttgccctgaaaagtgccgctgtgaagggaccacagtagattgctcc
aatcaaaaactcgccaaaatcccagaccacattccccagtacactgcagagctacgcctc
aataataatgaatttacagtgttggaagctacaggcatcttcaagaaacttcctcaatta
cgtaaaataaattttagcaacaataagatcacagacattgaagagggagcatttgaaggc
gcagctggtgtaaatgaaatacttctcacgagtaatcgtttggaaaatgttcagcataag
atgttcaagggattggaaagcctcaaaactttgatgttgagaagtaatcgtataagctgc
gtagggaacgacagtttcacaggactcagttctgtgcgtttgctttctttatatgataat
caaattactacaatcgcaccaggggcttttgatactctccattctttatctactctaaac
ctcttggccaatccttttaattgtaactgctacctggcttggttgggagaatggctcagg
aagaaaagaattgtaacgggaaatcctcgatgtcagaaaccctacttcctcaaagaaatc
cccatccaggatgttgccattcaagacttcacttgtgatgatggaaatgatgacaatagt
tgttccccactctctcgctgtcctacggagtgtacctgcttggacacggtggtccgatgt
agcaacaaagccttgaaggtcttgcccaaaggtattccaagagatgtcactgaattgtat
ctggatggaaaccagtttacactggttcctaaggaactctctaactacaagcatttaaca
cttatagacttaagtaacaaccgaataagcaccctttctaatcagagcttcagcaacatg
acccagctcctcaccttaattcttagttacaaccgtttgagatgcattcctcctcgaacc
ttcgatggattgaagtctcttcgattactttctttacatggaaatgacatttcagttgtg
cctgaaggtgctttcaacgatctttctgcattatcacacctagcaattggagccaaccct
ctttactgtgattgtaacatgcagtggttatccgactgggtaaagtcggaatacaaagaa
ccaggaattgctcgctgtgctggtcctggagaaatggcagataaactattactcacaact
ccctccaaaaaatttacatgtcaaggtcctgtagatgtcaatattctagctaaatgtaat
ccctgcttatcaaatccatgtaaaaatgatggcacctgtaacaatgatccagttgacttt
tatcgctgcacctgtccatatggtttcaaggggcaggactgtgatgttccaattcatgca
tgcatcagtaacccatgtaaacatggaggaacttgccacttaaaagaaggagaaaaagat
ggcttctggtgtatttgtgctgatggatttgaaggagaaaattgtgaaatcaatgttgat
gactgtgaagataatgactgtgaaaataactctacatgcgtcgatggaattaataactac
acatgcctttgcccacctgagtacacaggtgagttgtgtgaggagaagctggacttctgt
gcacaggacctgaacccctgccaacacgactccaagtgcatcctgacgccaaagggattc
aaatgtgactgcacgccaggatacataggcgaacactgtgacattgactttgatgactgc
caagataacaagtgtaaaaacggagcccactgcactgatgcagtgaacagttatacatgc
atctgccccgaaggttacagtggcttgttttgtgagttttctccacccatggttctccct
cgtaccagcccctgtgataattttgattgtcagaatggagctcagtgcatcatcaggata
aatgagccaatatgccagtgtttgcctggctaccagggagagaagtgtgaaaaattggtc
agtgtgaactttgtaaacaaagagtcttatcttcagatcccttctgccaaggttcggcct
caaacaaacatcactcttcagattgccacagatgaagatagtggaatcctcttgtataag
ggtgacaaagaccatatcgccgtagagctctaccggggacgtgttcgtgccagctatgac
accggctcccacccagcttctgccatttacagcgtggagacgatcaatgatggaaatttt
cacattgtggaactactcgccctggatcaaagtctctccctctctgtggatggagggagc
cccaaaatcatcaccaacttgtcaaagcagtccactttgaattttgactccccactctat
gtcggaggcatgcccgggaagaacaacgtggccgcagctctgcgccaggcccccgggcag
aacggcacaagcttccacggctgcatccggaacctttacatcaacagcgagctgcaggac
ttccggaaggtgcccatgcagaccggcatcctgcccggctgtgagccgtgccacaagaag
gtgtgtgcccacggcacgtgccagcctagcacccagtccggcttcacctgcgagtgccag
gaaggatggacggggcccctctgtgaccagaggaccaatgacccctgtcttggaaataaa
tgcgtccatggcacctgtctgcccatcaacgcgttctcctacagctgcaagtgcctggag
ggccatgggggcgtcctctgtgatgaagaggaggatctgtttaacccctgccaggcgatc
aagtgtaagcatgggaaatgcaggctctcaggactgggacagccctactgtgaatgcagc
agtggatacactggggacagctgtgatcgagaaatctcttgtcgaggggaacggataaga
gattattaccaaaagcagcagggctatgccgcttgccaaacaactaagaaggtctcccgg
ttggaatgcagaggggggtgtgcaggcgggcagtgctgcggacctctgaggagcaagcga
cggaaatacactttcgaatgcactgatgggtcatcgtttgtggacgaggttgagaaggtg
gtgaagtgtggctgtacccactgcgcctcctaa
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integrated database retrieval system
