Orcinus orca (killer whale): 101289549
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Entry
101289549 CDS
T05247
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X3
KO
K20053
very low-density lipoprotein receptor
Organism
oor
Orcinus orca (killer whale)
Pathway
oor05017
Spinocerebellar ataxia
oor05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101289549 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101289549 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101289549 (VLDLR)
Membrane trafficking [BR:
oor04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101289549 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
101289549
NCBI-ProteinID:
XP_004286272
LinkDB
All DBs
Position
6:complement(67639609..67671901)
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AA seq
845 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESGTTGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPSRWQCDGDPDCEDGSDESPEQCHMRTCRISEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNVTCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCTPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCQPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDKKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRALVTADIQ
WPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRVVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHALVQPSGKNWCKEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYRLEDNGRECQKINVTTAVSEVSVPPKGTSAAWAILPLLLL
AMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagcggcaccaccggagcgggaagaaaagccaaatgtgaaccctcccaattccagtgc
acaaatggccgctgtattacgctgctgtggaaatgcgatggggacgaagactgtgctgat
ggcagtgacgaaaaaaactgtgtgaagaagacgtgtgccgagtctgactttgtgtgcaac
aatggccagtgtgttcccagccgatggcagtgtgacggggaccccgactgcgaagatggt
tctgatgaaagcccagagcagtgccatatgagaacatgccgcataagtgaaatcagctgt
ggtgcccgttccactcagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacgtgacgtgcagccctgatgagttcact
tgctccagtggccgctgcatctccaggaatttcgtgtgcaatggccaggatgactgcagc
gacggcagcgacgagcttgactgcaccccacccacctgcggggcccacgagttccagtgc
agcacctcctcctgcatccccatcagctgggtgtgcgatgacgacgcagactgctcggac
cagtcggatgagtcgctcgagcagtgcggccgccagccagtgatccacaccaagtgccca
gccagcgagatccagtgcggctctggcgagtgcatccacaagaagtggcgatgtgacggg
gatcctgattgcaaggatggcagcgatgaggtcaactgtccttcccgaacctgccaacct
gaccagtttgagtgcgaggacggtagctgcatccacggcagcaggcagtgcaacggcatc
cgagactgtgtcgacggttctgatgaagtcaactgcaaaaatgtcaatcagtgcttgggc
cccgggaaattcaagtgcagaagcggggaatgcatagatatcagtaaagtgtgtaaccag
gagcaggactgcagggactggagtgatgagcccctgaaagaatgtcatgtaaatgaatgc
ttggttaataatggcggatgctcccatatctgcaaagacctagttataggctacgaatgt
gactgtgcagctgggtttgaactgatagataagaaaacctgtggagatattgatgaatgc
caaaatccgggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatagacgggacatcaggaagattggcttggagaggaaagaa
tatatccaactagttgaacagctaagaaacactgtggctctcgatgctgacattgctgct
cagaaactattctgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagatggaaccaagaggaagttcctgtttaactctgacttgcgagagcctgcctcc
atagctgtggacccgttgtctggctttgtttactggtcagactggggtgaaccagctaaa
atcgaaaaagccggaatgaatggatttgatagacgggcgctggtgacagcggacattcag
tggcctaacggaattacacttgacctcataaagggccgcctctattggctggattccaaa
ttgcacatgttatccagtgtggacttgaacggccaagatcgcagggtggtcctaaagtct
ctggaattcctagctcatcccctcgcgctcacaatatttgaggatcgtgtctactggata
gatggggaaaatgaagccgtctacggcgccaataaattcactggatcggagctggccact
ctagtcaacaaccttaacgatgcccaagacatcatcgtctatcatgcacttgtacagcca
tcaggtaaaaactggtgcaaagaagacatggagaatggaggatgtgaatacctctgcctg
ccagccccacagattaatgaccactctccaaaatatacctgttcctgtcccaatggctac
cgtctagaggacaatggccgagaatgccaaaagatcaatgtgaccacagcagtatcggag
gtcagtgttcccccaaaagggacttctgctgcctgggccatccttcccctcttgctctta
gcaatggcagcagtaggtggctacttgatgtggcggaactggcaacacaagaacatgaaa
agcatgaactttgacaatcctgtgtacttgaagaccactgaagaggacctgtcaatagac
attggtagacacagtgcttctgtcggacacacgtacccagcaatatccgttgtaagcaca
gacgacgatctagcttga
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integrated database retrieval system
