Orcinus orca (killer whale): 101289681
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Entry
101289681 CDS
T05247
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X4
KO
K15623
protein SSXT
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03082
ATP-dependent chromatin remodeling
oor05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101289681 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101289681 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101289681 (SS18L1)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101289681 (SS18L1)
GBAF(ncBAF) complex
101289681 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
101289681
NCBI-ProteinID:
XP_004282377
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All DBs
Position
16:complement(2391743..2421664)
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQSLALGPGGLSQSGSGQGLHSQGSLSDAISAGLPPPSLMQ
AQIGNGPNHVTLQQTAQSTLPTTSMSMSGSSHGSGPGYSHSGPASQSIPLQGQGAISSYV
SRANINMQSNPVSMMHQQAASSHYSAAQGGSQHYQGQSMAMMGQSGQAGSMMGQRPMAPY
RPSQQGSSQQYLGQEEYYGGEQYGHGQAASEPMSQQYYPDGHGDYAYQPASYTEQSYDRS
FEESTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcgtccgcccggccgagaggcaaaggggaggtcacgcagcaaacc
atccagaagatgctggacgagaaccaccacctgatccagtgcatcctggactatcagagc
aagggcaagacggccgagtgcacccagtaccagcagatcctgcaccggaacctggtctac
ctggccacgatcgcggattctaaccagaacatgcagtccctgctgcccgccccgccaacc
cagagcctggcgctgggccccggagggctgtcgcagagcggctcgggccagggcctgcac
tcgcagggcagcctcagcgacgccatcagcgcgggcctgccgccaccctccctcatgcag
gcccagatcggcaacggtccaaaccacgtgactctgcagcagacggcgcagagcacgctg
cccaccacctccatgagcatgtccggcagcagccacggctcggggcccggctacagccac
tcgggaccggcctcgcagagcatccccctgcagggccagggcgccatcagcagctacgtg
tcccgggccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcc
tcgtcccactacagcgcggcccagggcgggagccagcactaccagggccagtccatggcc
atgatgggccagagcgggcaggcgggcagcatgatggggcagcggcccatggcgccctac
cggccctcccagcaaggctcgtcccagcagtacctgggccaggaggagtactacggcggc
gagcagtacggccatggccaggccgcctcggagcccatgagccagcagtactacccggac
ggacatggcgattacgcctaccagccggcgtcctacacggagcagagctatgaccggtcg
tttgaggagtccacgcagcactactacgagggcggaaactcacagtacagccagcagcag
gcggggtaccagcagggcacagcccagcagcagacgtactcccagcagcagtaccccaac
cagcagagctaccctgggcagcagcaaggctatgggcctgcccagggcgccccctcgcag
tactccagctaccagcagggacaaggccagcagtatggaagctaccgagcgtctcagacg
ggcccgtccgcccagcagcagcggccttacggctacgagcagggccagtacggaaattac
cagcagtaa
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