Orcinus orca (killer whale): 101289856
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Entry
101289856 CDS
T05247
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oor03009
]
101289856 (DDX56)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101289856 (DDX56)
Ribosome biogenesis [BR:
oor03009
]
Eukaryotic type
Pre-60S particles
Helicases
101289856 (DDX56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
101289856
NCBI-ProteinID:
XP_004283027
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All DBs
Position
9:complement(96315266..96324401)
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AA seq
546 aa
AA seq
DB search
MEDPETLGFEHMGLDHRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQHLLHKKATGPAVEQAVRALVLVPTKELARQAQSMIQQLAAYCARDIRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRILNHLQQDNLKLQDSLELLVVDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKSLLFVNTMERSYRLRLFLEQFSIPACVLNGELPLRSRCHI
ISQFNQGFYDCVIATDAEVLGPPVKGKHRGKGPKRNRAADPEAGVARGIDFHHVCAVLNF
DLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQPHLGKIEELLSGGSGAPILLPYQFRM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGHVPDYLVPPALRGLLHPHKKRKKPPSSKKAKKAKTQNPLRSFRHREEKRG
PTAAPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcccgaaacgctgggctttgaacacatgggcctggaccaccggctcttacag
gccgtcaccgacctgggctggtcgcgacccacgctgatccaggaaaaggccatcccactg
gccctggaggggaaggacctcctggctcgggcccgcacgggttcagggaagaccgccgct
tatgccattccgatgctgcagcatctgctccacaagaaggcgacaggccccgcggtagag
caggctgtgagagcccttgtccttgtgccgaccaaggaactggcacggcaggcccagtcc
atgattcaacagctggctgcctactgtgctcgagacatccgggtggccaatgtctcagct
gctgaagactcagcctctcagagagctgtactgatggagaagcccgatgtagtggtgggg
accccatcccgcatattaaaccacttgcaacaagacaacttgaaactgcaagactccctg
gagctgctggtggtcgatgaggctgatcttcttttctcctttggctttgaggaggaactc
aagagtcttctctgtcacttgccccggatttaccaggcttttctgatgtcggctactttt
aatgaggacgtacaagcactcaaggagctggtactgcataacccggttaccctcaagtta
caggagtcccagctgccagggccagaccagttacagcagtttcaggtggtctgtgagact
gaggaagacaaatttctgttgctgtatgccctgctcaaactgtcattgattcggggaaag
tctctgctcttcgttaacacaatggagcggagttaccggctgcgcctgttcctggagcag
ttcagcatccccgcctgtgtgctcaatggagagctcccgctgcgctccaggtgccacatc
atctcacagttcaaccaaggcttctatgactgcgtcatagcaacagatgctgaagttttg
gggcctccagtcaagggcaagcatcggggcaaaggacccaagcggaacagggccgctgat
ccggaggctggtgtggcccgcggcatagacttccaccacgtgtgtgctgtgctcaacttt
gatctcccccccacccccgaggcctacatacatcgggccggcaggacggcacgtgccaac
aacccaggcatcgtcttgaccttcgtgctgcccacggagcagccccatctgggcaagatc
gaggagcttctcagcggagggagtggagcccccatcctgcttccctaccagttccgcatg
gaggagatcgagggcttccgctaccgctgcagggacgccatgcgctcagtgactaaacaa
gccatccgcgaggcgaggctgaaggagatcaaggaggagcttctgcactccgagaagctc
aagacgtactttgaagacaaccccagggatctccagctgctgcggcacgacctacccttg
caccccgctgtggtgaagccccacctgggccacgtccctgactacctggttcctcctgct
cttcgcggcctcctccaccctcacaagaagcggaagaagcccccttcctctaagaaggcc
aagaaggcgaaaacccagaacccactgcgcagcttcaggcacagagaagagaagcgcgga
cccacagcagcgccctcctaa
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