Orcinus orca (killer whale): 101289869
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Entry
101289869 CDS
T05247
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X3
KO
K06084
F-box protein 20
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101289869 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101289869 (LMO7)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101289869 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101289869
NCBI-ProteinID:
XP_012393894
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All DBs
Position
18:complement(29552835..29688253)
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AA seq
1355 aa
AA seq
DB search
MQDHNKDDMSYRRISAIEPKSALPFNRFLPNKGRQPSYVPAPLRKKKLDKNEDNRRSWTS
PVCIEADGTFPSNERRTWGTNVENWPTVPETSDSSCYLEEAEEKTSIPNTVRDDLYVRKL
SPIMPSPGNAFDQFLPKCWIPEDVNWKRIKRETYKPWYKEFQGFSQFLLLQALQTYSDDI
LSSETHIKIDPTAGPRLITRRKNLSYAPGYRPDDLEMPALDPDLENDDFFVRKTGAFHAN
PCVLRAFEDLRRLSGQDDPVEQDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGA
PDRYQPVPFPEPWTLPPEIQAKFLCVLERTCPPKEKSNSCRVLVPSWRQKKDDMLARKIQ
SWKLGTTVPPVKFTPGPCSEADLQKWESIREASRLRHRKRLMVERLFQKIYGENGSKSMS
DVSAEDAQNLRQLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEI
EKQSLEKSERRSKTFNEMLQDRESPNQMSTVTSRRKLYSSDDGVDEEKLPPMLTMSEVSS
QSERVEEKGTTYPMEIPKQDSTAFAKREATITAEIQLPSKSPVEEQRPASLSSQHSRQME
STRVSAALPRSYQKTDAARLTSVVTPRPFGSQSRGISSLPRSYTMDDSWKYNGDVEGIKR
TQSSSVSISVQRPDTSQLASRSSSETEASAPRESVMRLLSPTPTFSSPSQGQAATSKDTL
SSTSSPDLTSELGEGRSSPRTEVSRSQDQFSDMRISINQTPGNSLDFGFTVKWDFSRIFV
ASVEPGSPAEFSQLQVDDEIIAINNTKFSHKDTKEWEETMANAQETGNLVMDIRRYGKSG
SPETKWIDATSGIYSSDKSSNLSITADFSESLQNSNTESKEINGIRDESNTFESKASEPI
SLKNLKRRSQFFEQGSSDSVVPDLPVPTISAPSRWTWDQEGERKRQERWQKEQDRLLQEK
YQREQEKLREEWQRAKQEAERENSKYLNEELMVLNSNSISLTTREPAVATRGEESKAPDS
EGTPAEEETRQQQQQEKDQEQKRRQAEAEAEADEQKRQAERERETSIQIYQYRRPVDSYD
IPKREEESSGLLPSDRNKSKSTTELDDYPTNKNGSNRYLDRTGSSSSSQKSSKKEQVPSG
AELERQQILQEMRKRTSLYDDNSWIRQRSSSVNKEPICLPGIMRRGESLDNLDSPRASSW
RQSPWLNQPSGVYATSSVQDFSRPPPQLLSTSNRAYMRNPSSGVPPPSAGSGKTTTPSPI
LRSHSPAVPQPGCQPRNRSVSGKRMCSYCHNILGKGAAMIIESLGLCYHLHCFKCVACDR
DLGGSSSGAEVRIRNNQLYCNDCYLRFKSGRPTAM
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccataataaagatgatatgtcatatcgaaggatttcggctattgaaccaaag
tccgctttaccatttaatcgctttttacccaacaagggtagacagccatcctatgtgccg
gcgcccttaaggaagaaaaagctggacaaaaatgaggataacagaagaagctggacaagc
ccagtctgcatagaagccgatggaacatttccaagtaacgagaggagaacttggggcaca
aacgtggagaactggccaacagtaccagaaacttcagactcctcttgttatttggaagag
gcagaagaaaagacaagcatacccaacactgtaagggatgatctttatgtgcgaaagcta
agcccaatcatgccaagcccagggaatgcttttgatcagtttcttcccaaatgctggatc
ccagaagatgtgaactggaaacgaataaaaagggaaacttataaaccatggtataaagaa
tttcagggcttcagtcagtttttattacttcaggccctccagacatattctgatgacatc
ttgtcttctgaaacacatatcaaaattgatcccactgctggcccaaggctcataacacgc
agaaagaatctctcttatgcaccaggatatagaccagatgacctggagatgccagccctg
gatcctgacttagagaatgatgatttctttgtcagaaagactggggctttccatgcaaac
ccatgtgttcttcgggctttcgaagacttaagaaggctttctgggcaagacgatcctgta
gagcaagatataatactgcagtgtagggaaggtgaacttgtacttccagacctagaaaaa
gatgatatgattgttcgccgcattccagcacagaagaaagaggtgcctctgtcgggagcc
ccagatagataccagccagtccctttccccgaaccctggactcttcctccggaaattcaa
gcaaaatttctctgtgtacttgaaaggacatgcccacctaaagaaaaaagtaatagctgt
agagtgttagttccttcctggaggcagaagaaagatgacatgttggctcgtaagatccaa
tcttggaagctgggaactactgtgcctccagtcaagttcacccctggtccctgcagcgag
gccgacttacagaagtgggagtccatccgggaggccagcaggcttagacacaggaagcgg
ctgatggtggagagactctttcaaaagatttatggtgagaacgggagcaagtccatgagt
gatgtcagcgcagaggatgctcagaacttgcgtcagctgcgttacgaggagatgcagaaa
ataaagtcacagttaaaagaacaagatcagaaatggcaggatgaccttgcaaaatggaaa
gatcgtcggaaaagctacacttcagatttgcagaagaaaaaagaagagagggaagagatt
gagaagcagtcgcttgagaagtctgagagaagatctaagacatttaacgaaatgctgcag
gacagggaatccccaaatcagatgtctacagtgacatcgaggaggaaactgtattcttct
gatgatggagtggatgaagaaaaacttccccctatgctgactatgtcagaagtaagttcc
cagagtgagagagtagaagagaagggaaccacttatccgatggaaattcctaagcaagat
tctacagcttttgcaaaaagggaggctactatcacagctgaaattcagcttccttcgaaa
agccccgtggaagaacaacgcccagcctctttgtcttctcagcattcacgacaaatggag
tcaactcgagtttcagctgctctccctagaagttaccagaaaactgatgcggccaggtta
acgtctgtggtcacaccgagaccttttggatctcagtcaaggggaatctcatcactcccg
agatcctacacgatggatgattcttggaagtataatggagacgtagaaggcattaagaga
acccaaagcagttcggtcagcatctctgtgcaaagacctgacacgagccagcttgcgtcc
aggtcatccagcgaaacagaggcatcagcacccagagaaagtgtgatgaggctgctctct
cctacacccaccttctcatctccttcccagggccaggctgccacttcgaaagacacgtta
tcttcaacatctagccctgatttaacgtctgagcttggagaagggagaagctcaccacgg
acagaggtctcaagatcacaggatcagttcagtgatatgagaatcagcataaaccagacg
cctgggaacagccttgactttggatttacagtaaaatgggatttttccaggatcttcgta
gcatcagtcgaaccaggtagcccagcagaattttctcagctacaggtagatgatgaaatt
attgctatcaacaacactaagttttcacataaggacacaaaagagtgggaggaaaccatg
gctaatgctcaggaaactggaaacctagtaatggatatcaggcgctatggaaagtctggt
tcacctgaaacaaagtggattgatgcaacttctggaatttacagctcagacaaatcttca
aatctatcaataacagctgatttctcagaaagccttcagaattctaatactgaatcaaag
gaaattaatggaattcgtgatgaaagcaatacttttgaatcaaaagcctctgaacctatt
tctttgaaaaacttaaaaaggcgatcacaattttttgaacaaggaagttccgattctgtg
gtgcctgaccttccagtcccgaccatcagtgccccgagtcgctggacgtgggatcaggaa
ggggagcggaagcggcaggagaggtggcagaaagagcaggaccgcctgctgcaggaaaaa
tatcaacgtgaacaggagaagctaagggaagagtggcagagggctaagcaggaggctgag
agagagaattccaagtacttgaatgaggagctaatggtcctaaactcaaacagcatttct
ctgaccacacgggagcctgctgtggccacccggggcgaagagtccaaggcacctgacagc
gaaggaaccccggcagaggaggaaacgaggcagcagcagcagcaagagaaagaccaggag
cagaagcggcgccaggcagaggcagaggcagaggcagacgagcagaagcgccaggcggag
agagagagggaaacttctatccaaatataccagtacagaaggccggttgattcctatgac
ataccaaagagagaagaagaatcttcaggtttgcttcctagtgacaggaataaatccaaa
tccactactgaactggatgattaccccacaaacaaaaatggaagcaatagatatttagac
cgaactgggagcagtagctcatcgcagaaaagctccaagaaggaacaagtcccatcagga
gcggagttggagagacagcaaatccttcaagaaatgaggaagagaacgtccctttatgat
gacaacagctggatccgacagcgcagttccagtgtcaataaagagcctatttgtctgcct
gggattatgagaagaggtgaatctctagataacctggattccccgagagccagttcttgg
cgacagtccccttggctcaaccagccttcaggagtctatgccacttcctctgtccaagac
ttcagtcgccccccacctcagctgctgtccacttcgaaccgtgcctacatgcggaacccc
tcctccggcgtaccccctccctcagcgggttccgggaagaccaccaccccgtcccccata
ctgcgcagccattcccctgcggttccgcagcccggctgccagccacgcaacaggtcggtc
agtgggaagcgcatgtgctcctattgtcataacattctgggcaaaggagccgccatgatc
atcgagtccctgggtctttgttatcatttgcattgttttaagtgtgtggcctgtgatcgt
gacctcggaggctcttcctcaggagccgaagtcagaatccgaaacaaccaactgtattgc
aacgactgctatctcagattcaaatctggacggccaaccgccatgtga
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