Orcinus orca (killer whale): 101289980
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Entry
101289980 CDS
T05247
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor05202
Transcriptional misregulation in cancer
oor05206
MicroRNAs in cancer
oor05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101289980 (ZEB1)
05206 MicroRNAs in cancer
101289980 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
101289980 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101289980 (ZEB1)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
101289980 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2HE
Zn_SUZ12
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
101289980
NCBI-ProteinID:
XP_012391762
LinkDB
All DBs
Position
2:2993812..3194922
Genome browser
AA seq
1114 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESITDAADCEGGAPED
GLPTDQAVLPGSSAREGNVKSCWEDDAGKEGREILGPEARADEVGGTVKDDECDSDAENE
QNHDPNVEEFLQQQDTAVIYPEAPEEDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVN
GRPRTGLKTSQCPSPSLSASPGSPTRPQIRQKIENKPFQEQLSVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGGPLQATSTPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNQANLASKEQETISASSIQQGGHSVISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENPVPTNSCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPG
DISALPELKHYDLKQPAQPHLPPTPEGAKPEASAPSGSGDGSLSPSQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPPDVVKKWFEKMQTGQTPVQSSEASSPEPGKANIPAKND
DQPQPTNADESQDGTRNLQSPLKISGSPVLPVGSAVNGSRSSASSPSPLNLSSSGNAQGY
SYPAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQK
DSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTLLIP
QVAYTYSTAVSPAAQEAALRVAQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHTRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEGPEAGAAGPGGPPAHHAGARASPSQGDS
DERESSTREEDEDSDKEEEEEEEEREMEDLQEEKESGGPQGGEGREGEGREGEGRANSEE
GAREGAGAGSPAHSLEHKVSQGAEQVSEEKTNEA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaactataatactgtggtagaaacaaattcagattcagacgatgaagacaaactccac
attgtggaagaagaaagtatcacggatgcagcagattgtgaaggtggcgccccagaggat
ggcctgccgacagaccaggcagtgctgcctgggagcagcgcaagggaagggaacgtgaag
agctgctgggaagacgatgcaggaaaggaaggacgagaaatcctggggcctgaagctcgg
gcagatgaagtgggaggtacagtaaaagatgatgaatgcgactcagatgcagaaaatgaa
caaaaccatgatcctaacgttgaagagttcctgcagcaacaagacactgcagtcatctac
cccgaggcgcccgaggaggaccagaggcagggcacgccggaggccagcgggcacgatgaa
aacggaacaccagatgcattttcccagttactcacctgcccatattgtgacagaggatat
aaacgctttacctctctgaaagaacacattaaatatcgccatgaaaagaacgaagacaac
ttcagttgctccctgtgcagttacacctttgcgtacagaacccagctcgaacgtcacatg
acctcccacaaatcaggaagagatcaaagacatgtgacgcagtctgggggtaatcgtaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaagagcactta
agaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccat
tccggttcctatagctcacacataagcagtaagaaatgtatcagcctgatgcctgtgaac
gggcgaccacgaacagggctcaagacctcgcagtgtccctcaccatctctctcggcatca
ccaggcagtcccacgcgaccacagatacggcagaagatagagaataagcccttccaagaa
caactttccgtaaaccaaatcaaaacggagcctgtggattatgagttcaagcccatagtg
gttgcttcaggaatcaactgttcaacccctttacagaatggggttttcagtggtggtggc
cccttgcaggcaaccagtactcctcagggtgtggtgcaagccgttgttctgccaacggtg
gggttggtgtcccccatcagtatcaatttaagtgatattcagaatgtacttaaagtggca
gtagatggtaatgtaatcaggcaagttttggagaataatcaagccaatcttgcatccaaa
gaacaagaaacaatcagcgcgtcatccatccagcaaggtggccattctgttatttcagcc
atcagtcttcctctggtggatcaagatggaaccaccaaaatcatcattaactacagtctt
gaacaacctagccaacttcaagttgttcctcagaatttaaaaaaagaaaatccagtcccc
accaacagttgcaaaagtgaaaagttaccagaagatcttactgttaaatctgagaaggac
aaaagctttgaaggaggagggaacgacagcacttgcctcctgtgtgacgactgtccaggg
gacatcagcgcacttccggagctaaagcactatgacctgaagcagcccgcccagccccat
ctgccccccacgccagaaggtgccaagcccgaggcctctgctccctcggggtccggagac
ggcagcctgtctcccagccagccacctttaaagaacctcctgtctcttctgaaagcgtat
tatgctctgaatgcacagccaagtgcagaagagctctcaaaaattgctgactcagtgaac
ctaccgccggatgtagtgaagaagtggtttgaaaagatgcagacgggacagacgccagtg
cagtcttctgaggcatcttctcccgagccaggcaaagccaacatccctgctaagaacgat
gaccagcctcagcccacaaacgcagatgaatcccaggacggcacgaggaatctccagagt
cctctgaagataagcggctcccccgtcctaccagtgggctccgcggtcaacggttccaga
agcagcgcatcgtccccatcccccctcaacctctcctcctccggaaacgcacagggttac
tcgtacccggcagaaggggcacaggaagagccacaggtcgaacctcttgatctttcacta
ccaaagcaacagggagagttattggaaaggtcaacgatcactagtgtttaccagaacagt
gtgtattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaag
gacagttgtgtcacagactcagaaccagttgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctatacctacagtcactgcccagttacccacgatcgtggccatcgccgac
cagaacagcgttccgtgcttgcgagcgctggcggccaacaagcagaccctgctgatcccc
caggtcgcctacacgtactcgactgcagtcagcccggcggcccaggaagcagccctgagg
gtggcccagcccaacggaaatcaggatgaaaggcaagacactagctccgaaggagtatcc
aatgtagaagatcagaacgactctgactccacgccacccaaaaagaaaatgcggaagacg
gaaaatggaatgtatgcttgtgatttgtgtgataagatattccagaagagtagctcgttg
ttgagacataaatacgaacacacaggtaaaagacctcacgagtgcggcatctgcaaaaag
gcgtttaaacacaagcatcacctgatcgagcacacgcgcttgcattccggggagaagccc
taccagtgcgacaagtgcgggaagcgcttctcccactcgggctcctattcccagcacatg
aaccaccgctactcctactgcaagagggaggccgaggggcccgaggcgggggccgcgggc
ccagggggcccgcccgcgcaccacgcgggggcccgcgcctccccctcgcagggcgactcg
gacgagagggagagctccacgcgggaggaggacgaggacagtgacaaggaggaggaggag
gaggaggaggagagggagatggaagacctgcaggaggaaaaggaaagtggaggaccgcag
gggggggaggggcgcgagggggaggggcgcgagggggaggggcgagccaactccgaagaa
ggtgcgagggagggcgcaggagctggaagcccagcccacagcttagaacacaaagtcagc
cagggcgctgagcaggtgtctgaagagaaaacaaatgaagcctga
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