Orcinus orca (killer whale): 101290017
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Entry
101290017 CDS
T05247
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X7
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101290017 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101290017 (VTI1A)
Membrane trafficking [BR:
oor04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
101290017 (VTI1A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Laminin_II
Sec20
LMBR1
DUF6987
MMPL
FliG_N
Fusion_gly
Peptidase_S46
DUF1664
Sec8_N
DUF5339
DUF5344
HAAS
FapA
Motif
Other DBs
NCBI-GeneID:
101290017
NCBI-ProteinID:
XP_004265885
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Position
14:73048439..73425367
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AA seq
217 aa
AA seq
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MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQVVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLGKSSRV
LTGMLRRIIQNRILIVILAIVLVITILTAITLSVRRH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacttcgaaggctacgagcaggacttcgcggtgctcactgcagagatcacc
aataagattgcgagggtcccccgactcccgcctgatgagaagaagcaggtggttgcaaat
gtggagaaacagctcgaagaagcgaaagaactgttggaacagatggatttggaagtccga
gagatacctccccaaagtcgagggatgtacagcaacaggatgagaagctacaagcaagaa
atgggaaaacttgagacagattttaaaaggtcacggattgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaattcctcagagaaccagagggcacatctgctcgat
aacacagagaggctggaaaggtcatctcggagactagaggctgggtaccaaatagcagtg
gaaaccgaacaaattggccaggagatgttggaaaacctcagtcatgacagagaaaagata
cagagagcacgtgaaagacttcgggaaacagatgctaacttggggaaaagctccagggtt
ctgacagggatgttgagaagaatcatccagaaccgcatcctgatcgtcattctggccatc
gtcctggttatcaccatcctgacagcgatcactctttctgtcagaagacactga
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