Orcinus orca (killer whale): 101290063
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Entry
101290063 CDS
T05247
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oor03009
]
101290063 (DDX55)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101290063 (DDX55)
Ribosome biogenesis [BR:
oor03009
]
Eukaryotic type
Pre-60S particles
Helicases
101290063 (DDX55)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
101290063
NCBI-ProteinID:
XP_004276710
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Position
15:83208541..83225055
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AA seq
600 aa
AA seq
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MEHVTEGSWESLPVPLHPRVLGVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFIIPILEVLLRREEKLKKSQVGAIIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGG
RNPGEDVARFKEHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGAAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVKVMCIH
GKMKYKRNKIFTEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLAINQKCPLQEMKVQKNTVDLLPKLKSMALADRAVFEK
GMKAFVSFVQAYAKHECNLIFRLKDLDFASLARGFGLLRMPKMPELRGKQFPDFVPVDVS
TDTIPFKDKIREKQRQKLLEQQRKEKTENEGRRKFIKNKAWSKQKAKKEKKKKRNEKRKR
EEGSDIEDEDMEELLNDTRLLKKFKKGKITEEELEKGLLTSGTGSVKTADLGISDLEDDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctcccggtgccgctgcacccgcgggtg
ctgggtgtcctgcgggagctgggtttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaacaaagatgttgctgcagaagcggtcacaggtagtggcaaaaca
ctcgctttcatcatccccatcctggaggttctcctgagaagggaagagaagttaaaaaag
agtcaggttggcgccataatcatcacacccacgcgagagctggctgttcagatagatgag
gtcctgtcgcatttcacgaagcccttcccacagttcagccagattctctggattggaggc
aggaatcctggagaggatgttgcgaggtttaaggaacacggtgggaacatcattgtggca
accccaggccgcctggaggacatgttccgaaggaaggcagagggcctggatctggccagc
tgcgtgaggtccctggaggtcctggtgttggatgaagcggacaggcttctggatatgggg
ttcgaggcgagcataaacaccatcttggagtttttgccgaagcaaaggagaacgggcctc
ttctcggccactcagacacaagaagtggagaacctggtgagagcaggcctccggaaccct
gtgcgcatctcggtgaaggagaagggcgcggcggccagcagcacgcagaagaccccctcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaatcagctggtacat
tttcttcgaaatcataagcaggaaaaacacctggtcttcttcagcacttgcgcctgcgtg
gaatactatggaaaggctctggaggccctggtgaagggcgtgaaggtaatgtgcattcac
ggaaagatgaaatataagcgcaataagatcttcacggagttccgcaaattgcaaagtggg
attttagtgtgcactgatgtgatggcccgaggaatagatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcaatgccagtgccttcgtgcatcgctgtggccgcacagcc
cgcatcggccacggcggcagcgcgcttgtgtttctccttcccatggaagagtcgtacgtc
agtttccttgcaattaaccagaaatgccccctgcaggagatgaaagtccagaagaacaca
gtagacctccttccaaagctcaagtccatggccctggccgacagagctgtgtttgaaaag
ggcatgaaagcttttgtgtcgttcgtccaggcttatgcaaagcatgagtgtaacctcatc
ttcagattaaaggatctcgattttgcaagtcttgctcgaggttttggcctgctgaggatg
cccaagatgccagagctgagaggaaagcagtttccagatttcgtgcctgtggacgtcagt
acagacaccattccatttaaagataaaatcagagaaaagcagaggcagaagctattggag
caacaaagaaaagagaaaacagaaaatgaagggagaagaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaaaaaacggaatgaaaaaaggaaaagg
gaagagggttctgatatcgaagatgaggacatggaagaacttcttaatgacacaaggctc
ttgaaaaagtttaaaaaaggcaaaattactgaagaagaactcgagaaggggctgttgaca
agtggcacaggatcagtcaagacagcagatttggggatctcagatttggaagatgactgc
tga
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