Orcinus orca (killer whale): 101290106
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Entry
101290106 CDS
T05247
Symbol
UVSSA
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101290106 (UVSSA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101290106 (UVSSA)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101290106 (UVSSA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
HEAT_MROH2B_C
MPTase-PolyVal
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
101290106
NCBI-ProteinID:
XP_012386778
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All DBs
Position
4:complement(154185322..154219045)
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AA seq
677 aa
AA seq
DB search
MDQKLSELVEELTTSGEPQVNLEKMKELKKICKSSEEQLGRTYHLLMAQLSQEHAEVRLS
AFQVLDQLFARSHHFRMLVVSNFQEFLELTLGTDHERPLPPPREVAQKLRQAATRAIRGW
NEKYGTAYKKLALGFHFLMHNKQVDFQDVGARTLAERKRAEEKQKRLDRIYKERSEQAAR
EMEEMSGEIRSCLMELESCFRLLVPFDLDPTPGAAWPAMAEEGGRDEEQPCCSKTLAACT
RRPGAAGAEGPPAEHRDEDSDPEAFVRHHGLGSREYMLEVELSSDSLKVHEDEDNLVIIH
VVRDTLRLIQNKFLPAVCSWVQLFTRAGTRGRHLEGAIDLKAELETALRRSRDLDVMPEE
GCRREAAAPRDEDEDDEDFVEVPEKEGYEACVPEHLQPECGLEKVPATPASQARKRTRSS
EEACDPTSAAAQLHWLQRHLPPASPPSPRVPLGPEEAKKLAAERARAPVVPFGVDLCYWG
REEPMAGKILKSDSEHRFWKPREVDAEVESAAVSESLRSRQITFAGRFEPVQHRCRAPRP
DGRLCERQDRLKCPFHGKIIPRDDTGRPLHPEDRAREQKQKQQLQRQGGRPAWQDPELMR
DVEAATGVHLGSSRPGGKGRRRRSGLTDLKRQADTARARIAKKVFAKAAVQRVVTAMNQM
DRKKHEKFANQFNYALN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaaactttcagagttggtggaagagctcacgacttcaggagagccccaagtg
aatctcgagaaaatgaaggagctgaagaaaatttgcaagtcttcagaggagcagcttggc
cgcacctaccacctgctgatggcccagctgagccaggagcacgccgaggtccgcctctcc
gctttccaggtcctggaccagctgtttgccaggtctcaccatttcaggatgctagtcgtt
tccaacttccaggagttcctggagctcacactgggcaccgaccacgagcggcccctgcca
ccgcccagagaggtggcacagaagctgaggcaggccgccacccgggccatccgcggctgg
aacgagaagtatggtacagcctataagaagctggccctgggcttccacttcttaatgcac
aacaaacaggtagatttccaagatgtgggcgctaggactctggcggagagaaagcgagca
gaggagaaacagaagcggttggacagaatctacaaggagaggtctgagcaggccgcgcgg
gagatggaagaaatgtccggggagatccggagctgcctcatggagctggagagctgcttc
cgactgctggtgccctttgacctcgacccgaccccgggggctgcctggcctgccatggcc
gaggagggtggcagggacgaggagcagccctgctgcagcaagaccctggccgcctgcacc
cgccgcccgggagccgcgggtgcggagggcccgcccgcggagcacagggacgaggacagc
gaccccgaagcgtttgtgcggcaccacgggctgggctcccgcgagtacatgctcgaggtg
gagctctcctcagacagcctgaaggtgcacgaggatgaggacaacctggtcatcatccac
gtggtccgggacacgctcaggctcatccagaacaagttcttgccagccgtgtgctcctgg
gtccagctgttcacccgcgcagggacacgcggcaggcacttggagggtgctatcgacctg
aaggccgagctggaaaccgccctgaggcgatctcgggatctggatgtcatgcccgaggag
ggctgcaggagggaggcggcagccccgcgggacgaggatgaggacgacgaggacttcgtg
gaggtcccggagaaggagggctatgaggcctgcgtccctgagcacctgcagcctgagtgt
gggctggagaaagtcccggccacgccggcctcgcaggcaaggaagaggacgcggagcagt
gaggaggcctgcgaccccacctctgcggctgcccagctgcactggctccagcgccacttg
cccccggcctcacccccgagccccagggtgccgctgggtccagaggaggccaagaagctg
gcagcagagcgggcccgggcacctgtcgtgcccttcggggtggacttgtgctactggggc
cgagaggagccgatggctgggaagatcctcaagtccgactcggagcaccgcttctggaag
ccccgcgaggtggacgcggaagtagagagtgccgctgtctctgagtctctccggagccgc
caaatcacctttgcggggcgattcgagcccgtgcagcaccggtgccgtgccccccggccc
gacggccggctctgcgagcgccaagaccgcctgaagtgccctttccacgggaagatcatc
ccgagagatgacacgggacggcccctccatccggaggacagggcccgcgagcagaagcag
aagcagcagctgcagaggcagggggggcgcccagcctggcaggaccctgagctcatgagg
gacgtggaggcagccactggggtgcatcttggctcatccaggcccggtgggaagggcagg
cggcggcggtccggcctcaccgacctcaagcggcaggcggacacggcgcgtgcacgcatc
gccaagaaggtcttcgccaaggccgctgtgcagagggtggtcacagccatgaaccagatg
gaccggaagaagcatgagaagtttgcaaaccagtttaactacgcgctgaattag
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