KEGG   Orcinus orca (killer whale): 101290195
Entry
101290195         CDS       T05247                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X2
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101290195 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oor01009]
    101290195 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oor03400]
    101290195 (PNKP)
Enzymes [BR:oor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     101290195 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     101290195 (PNKP)
Protein phosphatases and associated proteins [BR:oor01009]
 HAD phosphatases
  Other HAD phosphatases
   101290195 (PNKP)
DNA repair and recombination proteins [BR:oor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101290195 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Zeta_toxin Hydrolase_6 HAD AAA_17 TSP1_spondin Viral_helicase1 NIF AAA_30
Other DBs
NCBI-GeneID: 101290195
NCBI-ProteinID: XP_004286205
LinkDB
Position
20:complement(52298066..52309029)
AA seq 523 aa
MARVEAQGRLWLESPPGGAPPIFLPLGGQALVLGRGPLTQVTDRKCSRNQVELVADPETR
TVAVKQLGVNPSTAGTQELRTGLEGSLGVGDTLYLVNGLHPLTLRWEEAHTPESQPDTPP
GTPPVAPEEEEEEEDEQQKKRIRKSSPGWESFQKLLVFTAPGVKPRGKVASFDLDGTLIT
TRSGKVFPTGPSDWRILYREIPQKLRELAAEGYKLVIFTNQMGIGRGKLPAELFKAKVEA
VVEKLGVPFQVLVATHAGLYRKPVIGMWDHLQGQANEGVPISIGDSVFVGDAAGRPASWA
PGRKKKDFSCADRLFALNLGLPFATPEEFFLKWPVARFELPAFDPRTVSCSGPLCLPESS
SLLSSDPEVVVAVGFPGAGKSTFLQEHLVSAGYVHVNRDTLGSWQRCVTTCEAALKQRKR
VVIDNTNPDIQSRARYIKCARDAGVPCRCFLFSTTLEQARHNNRFRDMTDSSHIPVTDIV
IYGYRKQLEAPTLAEGFSAILEIPFRIHVAPQLERLYRQFSEG
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggccagggtggaggcccagggccgcctgtggctggagagcccccctgggggagcgcct
cccatcttcctgcccttgggtgggcaagccctggtgctgggccgaggacccttgacgcag
gttaccgaccggaagtgctccagaaaccaagtggagctggtcgctgaccctgagactcgg
acggtggcagtgaaacagctgggagttaacccctcaactgccgggactcaggagctgaga
acagggttggagggttctctgggggtgggggacacgctgtatttggtcaatggcctccac
ccgctgaccctgcgctgggaagaggctcacacgccagaatcccagccagacactccacca
ggcacccctcctgtggccccggaggaggaggaggaggaggaggatgaacagcagaaaaag
cggataaggaagtcatcccctggctgggagagcttccagaagctgctagtgttcacggca
cctggtgtgaagccccggggcaaggtggccagttttgatctggatgggaccctcatcacc
acacgttctgggaaggtctttcccactggccccagtgactggaggatcttgtaccgagag
attccacagaagctccgggaactggctgccgagggttacaagctggtgatcttcaccaac
cagatgggcattggacgcgggaagctgccagcggagttgttcaaggccaaggtggaggct
gtggtggagaagctgggggtcccctttcaggtcttggtggccacgcacgcaggcttgtac
cggaagccggtgatcggcatgtgggaccacctgcaggggcaggccaacgagggcgtgccc
atctccatcggggacagcgtctttgtgggagatgcagctggacgcccagccagctgggcc
cccgggcgcaagaagaaagacttctcttgcgctgaccgcctgtttgccctcaacctgggc
ctgcctttcgccacgccagaggagttctttctgaaatggcccgtggcccgcttcgagctc
ccagcctttgacccgaggaccgtctcctgctctgggcctctttgcctccccgagtccagc
tccctcttaagctcagaccccgaggtggttgtcgccgtgggatttcctggggctgggaag
tccaccttcctccaggagcatctcgtgtcggccggatacgtccacgtgaacagggacact
ctgggctcatggcagcgctgcgtgaccacgtgcgaggcggccctgaagcaaaggaaacgg
gtcgtgattgacaacacgaacccggacatccagagccgagccaggtacatcaagtgtgcc
cgagacgcaggcgtcccctgccgctgcttcctcttcagcaccaccctggagcaggcacgt
cacaacaaccggttccgggacatgacggactcctctcacatccccgtgaccgacatcgtc
atttacggctacaggaagcagctcgaggcccccacgctggccgaaggcttctccgccatc
ctggagatcccgttccggatccacgtggcgccgcagctcgagcggctgtaccgccagttc
tcagagggctga

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