Orcinus orca (killer whale): 101290208
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Entry
101290208 CDS
T05247
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101290208 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oor03009
]
101290208 (NVL)
Ribosome biogenesis [BR:
oor03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101290208 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
TIP49
AAA_2
AAA_28
AAA_33
NPHP3_N
nSTAND3
Mg_chelatase
RNA_helicase
Zeta_toxin
ABC_tran
AAA_18
NACHT
IstB_IS21
AAA_17
AAA_3
ATPase
Rad17
Vps4_C
Viral_helicase1
TsaE
Sigma54_activ_2
Sigma54_activat
Parvo_NS1
DUF3540
DUF4473
Motif
Other DBs
NCBI-GeneID:
101290208
NCBI-ProteinID:
XP_004271045
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All DBs
Position
1:11266068..11365024
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AA seq
856 aa
AA seq
DB search
MKPRPARFVDNKLKQRVVQYLTSNRCGKYVDTGVLASDLQRMYSIDYGRRKRNAFRIQVE
KVFSIISSEKELKDLPELEDEHLAKRARHGEEDNEYNESYSDDDSNMEDYPDPQSANQMN
SSLLSLYRKGNPDSVSSTPDMERRETTISTPRITSKTGSIRLKTPARGSEGGWFIDKTPG
GKKDSFFSDLSDEKSNDKKPISEIENSKDSSLLESNKKRKGRLNSKRGKRKKEDLQEVDG
EIEAVLLKKAKARGLELQISKVKFEDVGGNDTTLKEVCKMLIHMRHPEVYHHLGVIPPRG
VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSNAPCI
LFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNDMAATARVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKVRLPETFHFRHLAHLTPGFVGADLMALCRE
AAMCAVNRVLMKLQEQQQKNPEIEGLPSEGGQEERIGTEPTSKTQDELQRLLGLLRNQDP
LSEEQLQGLCLELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP
VRNPDQFKAFGLETPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSVRETGASVRVVNQLLTEMDGLETRQQVFI
MAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAVA
GDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKVSQKHFEEAFKKVKSSVS
KEDQAMYEALQWSLSR
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaggcccgcgaggtttgtggataataagctgaagcagcgcgtcgtccagtac
ctcaccagtaaccgatgtggcaaatatgtggacactggagtcttagcatccgatttacaa
agaatgtacagtatagactatggtcgaagaaaaagaaatgcttttaggattcaggtagaa
aaagtatttagcataattagtagtgagaaggaacttaaggatctaccagaattagaagat
gaacatctggctaaaagagcaagacacggtgaagaggataatgagtataatgaaagctat
tctgatgatgattcaaatatggaagattacccagatccacagtcagcaaatcagatgaac
agttccctgctctccttataccggaaaggaaatcctgattctgtttcaagtactcctgac
atggagcgaagagaaaccacgatttcaacaccacggataacttccaaaacaggctccatt
cgtttgaagacccctgccagaggttctgaaggaggatggtttattgacaaaaccccgggt
gggaagaaagacagttttttctcagacctatcagatgagaaaagtaatgataagaagccg
atctctgagatagagaattcaaaagattcttctcttctggagagtaataaaaaaagaaaa
ggcaggctaaacagcaaaagaggcaaaaggaagaaagaagatcttcaggaagtagatgga
gaaatagaggctgtcctgctaaagaaagctaaagccagggggctagaattgcagatctcc
aaggtgaagtttgaagatgttggaggcaatgatacgacattaaaagaggtctgcaagatg
ctcatacacatgcgtcacccagaggtgtaccaccacctgggcgtcatacccccacgcgga
gttcttcttcatggaccaccgggctgtgggaagacgttgcttgcacatgcaattgctggg
gaacttgaccttccaatattgaaagtagctgctacagagattgtatctggagtatctgga
gaatcggaacagaagctgagagagctatttgaacaagctgtgtcaaatgcaccatgtatc
ctttttattgatgaaattgatgctattacccccaaaagagaagttgcttcaaaagatatg
gaacgaagaattgtagcccagctcctaacctgcatggacgatctgaatgacatggccgct
acagctcgggtcctagtcatcggagctactaaccgaccagactccttagaccctgctttg
agacgtgcaggaaggttcgaccgagagatatgcctaggtatcccagatgaagcatccagg
gaaagaatacttcaaactttgtgcagaaaagtaagacttcccgaaacttttcattttcgg
cacttagcacacctaacgccgggcttcgttggtgctgacctgatggcactctgccgagag
gcagccatgtgtgcagtcaacagggtcttaatgaagctgcaggagcagcagcagaagaat
cctgagattgaaggtttgccctctgaaggaggccaggaagaaaggattggaactgagccc
acttctaaaacacaggatgaattgcaaaggctcttggggttgctgaggaaccaagatccc
ctctcagaggagcagctgcaagggctgtgccttgagttgaatgatttcattgttgctcta
tcctctgtccaaccctctgctaaaagggaaggctttgtcactgtccctaatgtgacatgg
gcagatattggtgccctggaagacattagagaggagctcaccatggcaatattggcacca
gtacgtaacccagatcagttcaaagcttttgggttggagactccagctggagtcctcctt
gctggtccccctggctgtgggaaaactctgctggcaaaggctgttgcaaatgagtctggg
ttaaattttatatctgtcaaggggcctgagttactaaatatgtatgttggtgaaagcgag
cgtgctgtgcgacaggtttttcagcgagccaagaattcagcaccctgcgtgatattcttt
gatgaagtggatgccttatgtcctcgaagatcagtccgagagacaggggcaagtgtccgg
gtggtaaatcagctacttacagagatggatggtctggaaacacgtcagcaggtttttatt
atggcagccactaacagaccagatatcattgaccctgcaatcctgcgcccaggccgcctg
gacaaaacactctttgtgggtttgccacccccagcagatcgtctcgccatcttaaaaact
atcacaaaaaatggcaccaaacccccactggatgcagatgtaaatttggaagcagttgct
ggtgaccttcgctgtgattgctatacgggtgcagatctctctgctttggtacgggaggct
tctatctgtgccttgaagcaggaaatggcaagacagaagagtggaagtgaaaaaggtgaa
ctcaaggttagtcagaagcactttgaagaagctttcaagaaagtaaagtcatctgtatca
aaagaggatcaagcgatgtatgaagctctgcagtggtccctcagccggtga
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