Orcinus orca (killer whale): 101290336
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Entry
101290336 CDS
T05247
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oor03009
]
101290336 (DDX54)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101290336 (DDX54)
Ribosome biogenesis [BR:
oor03009
]
Eukaryotic type
Pre-60S particles
Helicases
101290336 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
101290336
NCBI-ProteinID:
XP_004281506
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All DBs
Position
15:74643069..74664397
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AA seq
879 aa
AA seq
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MAGGTRPAAAPRSRAAMAQWRKKKGLRKRRGAASQSRSSDSEDGEFEIQAEDDARAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLMEPVLIR
LDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRSLVRPQDQTVVFVATKHHAEYLSELLTA
QRVSCAHIYSALDQTARKINLAKFMHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPHEELSGAGGGDGVL
GRVPQSVVDDEDCGLRTSLETSLELRGLGRVADNAQQQYVRSRSAPSPESIKRAKELDLS
GLGLHPLFSSCFQEEELQQLRLVDSIRNYRSRATIFEINASSRDLSSQVMRAKRQKDRKC
IASFQQKRQKRQEQQEGPAIPAPSLPAPQEEQPEKEEAAGDSVEDLFTEVVGRKRQQPGP
NRGAKRRREEARQRDQVFYIPYRPKDFDSERGLSIGGDGGAFEQQVAGAILDLMGDEGQS
LTKGQQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDS
EEEGTFERRGPERRGGKRGRGQGASQPRTPGAPTGRVRSELKTKQQILKQRCRAQKLRFL
QRGGLKQLSARNRRRARELQQGAFGRGAHSKKGKMRKSL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggaacgcgtccggcggccgcaccgcggtcccgagctgccatggcccagtgg
aggaagaagaaggggctccggaagcgccggggcgcggcctctcagtcccgcagcagcgac
tcggaggacggcgagtttgagattcaggcagaagatgacgcccgggcccagaagctggga
cccggcagacccctacccaccttccccacctcggaatgcacctcggacgtggagccggac
acacgggagatggtacgagcccagaacaagaagaagaagaagtcgggaggcttccagtcc
atgggcttgagctacccagtgttcaaaggcatcatgaagaagggctacaaggtgccaaca
cccatccagaggaagaccatcccagtgatcctggatggcaaggatgtggtagccatggcc
cggacaggcagtggtaagacggcctgcttcctcatccccatgttcgagaggctcaagacc
cgcagcgcccagaccggggcccgcgccctcatcctctcacccacccgagagctggccctg
cagaccatgaagttcaccaaggagctgggcaagttcactggcctcaagactgccctgata
ctgggcggggacaagatggaagaccaatttgcagccctgcacgaaaatcccgacataatc
attgctacccctgggcgcttggtgcatgtggctgtggagatgaacctaaagctgcagagc
gtggaatatgtggtatttgatgaggctgacaggctctttgaaatggggttcgcagagcag
ctgcaggaaatcattgcccgcctccctgggggccaccagactgtcctgttctctgccaca
ctgcccaagctgctggtggagttcgcccgggctggcctcatggagcccgtgctcatccgg
ctagacgtggactccaaactcaacgagcagcttaagacctccttcttcctcgtgcgggag
gatgccaaggctgctgtgctgctccacctgctgcgcagcctggtgcggccccaggaccag
acagtggtatttgtggccaccaagcaccatgcggagtatctcagtgagctgctgacggcc
cagcgggtgagctgcgcccacatctacagtgccctggaccagacggcccgcaagatcaac
ctggccaagttcatgcacggcaagtgctcggccctcatcgtgactgacctggcagcccgg
ggcctggacatcccactgctggacaacgtcatcaactacagcttccccgccaagggcaag
ctcttcttgcaccgcgtgggccgtgtggcccgggctggccgaagcggcacggcctactcc
ttggtggccccagatgaggtcccctacctactggacctgcacctgttcctgggccgtgcc
ctgaccctcgcccgtccccacgaggagctctccggcgcgggcggcggggacggcgtgctg
ggccgggtgccgcagagcgtggtggacgatgaagactgcggtctgcggaccagcctggag
acgtcgctggagcttcggggcctgggccgcgtggccgacaacgcccagcagcagtatgtg
cgctcacggtcggcgccctcacccgagtccatcaagagggccaaggagctggacctctcg
ggcctgggcctgcaccccctcttcagctcgtgcttccaggaggaggagctgcagcagctg
cggctggtggacagcatcaggaactaccgctcccgggcgaccatctttgagatcaacgct
tccagccgggacctgagcagccaggtgatgcgtgccaagcggcagaaggatcgtaaatgc
atcgccagcttccagcagaagcggcagaagcggcaggagcagcaggagggcccggccatc
ccagccccgagcctcccagcaccgcaggaggagcagcctgagaaggaggaggcggcagga
gacagtgtggaggacctcttcacagaagttgtgggccggaagcggcagcagccaggaccc
aaccgaggagccaagaggcggagggaggaggcccggcagcgggaccaggtgttctacatc
ccctaccggcccaaggacttcgacagcgagcggggcctgagcatcggtggggacgggggt
gccttcgagcagcaggtggctggcgctatcttggacctgatgggggacgaaggccagagc
ctgaccaagggccagcagcagctcaagtgggaccggaagaagaagcggtttgtgggacag
tcgggacaggaggacaagaaaaagatcaagacggagagtggccgctatatcagcagctcc
tacaagagggacctctaccaaaagtggaaacagaagcagaaaattgatgatcgtgactca
gaagaagaagggacatttgaacggcgtggcccagagcgaagaggtggtaagcgcggccga
gggcaaggtgcatcccagccccgcacccctggtgcccccacaggccgcgtgcgctcagag
ctcaagaccaagcagcagatcctgaagcagcggtgccgagcccagaagctgcgcttcctg
cagcgtggaggcctcaagcagctctctgcccgcaaccggcgccgtgcccgggagctgcag
cagggcgccttcggccggggcgcccactccaagaagggcaagatgaggaagagcctgtaa
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