Orcinus orca (killer whale): 101290378
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Entry
101290378 CDS
T05247
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04612
Antigen processing and presentation
oor05145
Toxoplasmosis
oor05152
Tuberculosis
oor05164
Influenza A
oor05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
101290378 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101290378 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
101290378 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
101290378 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
101290378 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oor01001
]
101290378 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oor04054
]
101290378 (CIITA)
Enzymes [BR:
oor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101290378 (CIITA)
Protein kinases [BR:
oor01001
]
Serine/threonine kinases: Other
TAF1 family
101290378 (CIITA)
Pattern recognition receptors [BR:
oor04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101290378 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
101290378
NCBI-ProteinID:
XP_049555704
LinkDB
All DBs
Position
16:58363764..58412281
Genome browser
AA seq
1129 aa
AA seq
DB search
MRCLATRPAGSYLPEPQGSGQHTTMELGPLEGGYLELLNSNADPLHLYHLYDRMDLAGEE
ELELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFI
EHIGLEEMISESVEVLEEAGQKSQKRPFPEELPVDLKHRKLADPLAMPVVTSAFLVGLVS
DSSAQPCPSPPALFNKEPAPSQTRLEDTVPPSSSLLSCLSLPAGPIQIIPTLSTLPQGLW
QISGAGTGVSSILIYQGEMPQASQTPASSCTAVHSLPKSPDRPGSTSPFAPSAADLPSMP
EPALTSRTNLTEDEMSPTQCPAAHEASSKLPKWPESVEQFYCSLRNKYQAKPAGPEGILV
EVDLVRVRLERSSGKSQDRELTTLDWAERQPARGSLGEVLLASSNHRRPRETQVIAVLGK
AGQGKSHWVQTVSWAWACGQLPQYDFFFCIPCHCLDRPGDTYRLQDLLFSLGSQPLSVDD
EVFSYILRRPDRILLILDAFEELEAQDGFLHSAGGPTSAEARSLRGLLAGLFQRKLLRGC
TLLLTARPRGRLAQSLSKADALFEVAGFSAQQAETYVMRYFECSGTTEHQKRALALLQSQ
PFLLSHSHSPTVCRAVCQLLEALLELGDEAQLPSTLTGLYVGLLGPGARDSPPGALVGLA
RLAWELGRGHQSSLREGQFPSAEVRVWAVAQGLVQPTPGAPETKLAFSSFLLQCFLGAVW
LALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRACCLGALAGLAGSAS
AVRKQEVLTRYLKRLQPGALKAGRLLELLHCAHEALDAGLWQHVLQGLPAHLSFLGTRLT
PPDTYVLGSALEAAGRDFSLDLRSTGVDPSGLGSLVGLSCVTRFRAALSDTVELWESLQQ
HGEAKLLRAVKEKFTIEPFKAESMKDVEDLGNLVQIQRTRSSSEDTPGELPAIRDLKKLE
FALGPILGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLN
LSQNNITDLGACKLAEALPLLAASLLRLSLYNNCICDVGAESLAHVLPDMVSLRVLDVQY
NKFTAAGAQQLTASLRKCPHVEKLAMWTPTIPFGVQEHLQQLDSRIILR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctacgcgcccagccgggtcctacctgccagagccccaaggcagtgga
cagcacacaaccatggagttggggcctctagaaggtgggtacctggagcttctcaacagc
aatgctgaccctttgcatctctaccacctctatgaccggatggacctggctggagaagaa
gagctagagctctgctcagaacctgatacggacaccatcaactgcgaacagttcagcagg
ctgttgtgtgatatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaa
ctggaccagtatgtcttccaggattcccagctggagggcctgagcaaagacattttcatc
gagcacataggactggaagaaatgatcagcgagagtgtggaggtgctggaggaagcagga
cagaaaagtcagaaaagacccttcccagaggagctgcctgtggatctgaagcacaggaag
ctagctgaccccctagccatgcccgtggtgactagtgctttcctggtggggctagtgagt
gactcttcagctcagccctgcccatcaccacctgctctgttcaacaaggagccagcaccc
agccagacccggctggaggacaccgtgcccccttccagttccttgttgagctgcctgagt
ctccctgctggacccatccagatcatccccactctctccactctgccccaggggctctgg
caaatctcaggggctgggacaggggtctccagtatactcatctaccaaggtgagatgccc
caggccagccaaacacccgcctccagctgcacagctgtccacagcctcccaaagtcccca
gaccggcccggctccaccagcccctttgccccatcggcagctgacctccccagcatgcct
gaaccagccctgacctcccgtacaaacctaacagaggatgagatgtcccccacccaatgc
ccagcagctcacgaggcatccagcaagcttcccaagtggcctgagagtgtggaacaattc
tactgctcgctacggaacaagtaccaggctaagcccgcaggcccagaaggcatcctggtg
gaggtggacctggtgagggtaaggctggagaggagcagcggcaaaagccaggacagagag
ctgaccaccctggactgggcagagcggcagccggcccgaggaagtctgggcgaggtgctg
ctggcctctagcaaccaccggcggccacgtgagacgcaggtgatcgccgtgctgggcaaa
gcaggacaggggaagagtcactgggtccagaccgtgagctgggcctgggcctgcggccag
ctgccacagtacgactttttcttctgcatcccctgccactgtttggaccgtccgggggac
acctaccgcctgcaggatctgctcttctccctgggttcacagccactgtcagtggacgac
gaggtcttcagttacatcttgaggaggcccgaccgcattctgctcatcctggatgccttc
gaggagctcgaagcccaagacggcttcctgcacagtgcgggtggacccacgtcagcagaa
gcccgctccctccgggggctgctggcgggcctcttccagcgcaagctgctgagaggctgc
accctgctgcttacagcccggccccggggccgcctggcccagagcctgagcaaggccgac
gctctgttcgaagtggccggcttctccgcccagcaggccgagacctatgtgatgcgctac
tttgagtgttcggggaccaccgagcaccaaaagagagccctggcgctcctccagtcccag
ccatttctcctgagtcacagccatagccccactgtgtgccgggccgtgtgccagctcttg
gaggccctcctggagctaggtgatgaggcccagctgccttccacgctcacgggactctat
gttggcttactaggcccaggagcccgtgacagccccccaggggccctggtgggactggcc
aggctggcctgggagctgggccgcggtcaccagagcagcctgcgggagggccagttccca
tcggccgaggtgagggtctgggctgtggcccaaggcttggtgcagcccaccccgggggcc
ccggagaccaagctggccttctccagcttcctcctgcaatgcttcctgggggccgtgtgg
ctggctctgagcagcgaaatcaaggacaaggagctgccgcagtatttggcattgaccccg
aggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggtcgggctg
gtcttccagcctcgtgcctgctgcctgggagccctggcagggctggcgggctccgcctca
gcggtcaggaagcaggaggtgctcaccaggtacctgaagcggctgcagcctggggcgctg
aaggcggggcggctgctggagctgctgcactgcgcccacgaggcgctggatgccgggctt
tggcagcatgtgctgcaggggctcccggcccacctctcgttcctgggcacccggctcaca
cctcccgacacctacgtgctgggcagtgccttggaggcggcgggccgagacttctccctg
gacctccgcagcactggcgttgacccctctggactggggagcctcgtgggactcagctgt
gtcacccgtttcagggctgccttgagtgacacagtggagctgtgggagtccctacagcag
catggggaggccaagttactccgagcagtgaaggagaagttcaccattgagcctttcaag
gctgaatccatgaaggatgtggaagacctgggcaaccttgtgcagatccagaggacaaga
agttcctctgaagacacgcctggggaactccctgccatccgagacttaaagaagctggag
tttgcgctgggccccatcttgggccctcaggcttttcccaaactggtgaagatccttgag
gccttttcttcccttcagcatctggacctggactcactgagtgagaacaagatcggggat
gagggtgtcgcccagctctcggccaccttccctcagctgaaggccctggagacgctcaat
ttgtcccagaacaatatcactgacttgggtgcctgcaagctggcggaggccctgcccttg
ctggctgcgtccctcctcaggctgagcttgtacaataactgcatctgcgatgtgggagct
gagagcctggcacacgtgcttccagacatggtgtccctccgggtgctggatgtccagtac
aacaaattcacagctgccggggcccagcagctcactgccagcctgagaaagtgccctcac
gtggagaagctggcgatgtggacgcccaccatcccttttggcgtccaggaacacctgcag
cagctggactcaaggatcatcctgagatga
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