Orcinus orca (killer whale): 105748188
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Entry
105748188 CDS
T05247
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03040
Spliceosome
oor05202
Transcriptional misregulation in cancer
oor05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105748188
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
105748188
05205 Proteoglycans in cancer
105748188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
105748188
03009 Ribosome biogenesis [BR:
oor03009
]
105748188
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105748188
Spliceosome [BR:
oor03041
]
Complex A
U1 snRNP components
U1 related factors
105748188
Complex B
105748188
Ribosome biogenesis [BR:
oor03009
]
Eukaryotic type
Pre-60S particles
Helicases
105748188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
REC1
ResIII
Motif
Other DBs
NCBI-GeneID:
105748188
NCBI-ProteinID:
XP_049572329
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All DBs
Position
1:complement(171865884..171872836)
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AA seq
735 aa
AA seq
DB search
MPTSFLKYQQEGHLKNKRKLKRTNQRVGRSQDGRLGGRGIRVFAQLGHLPGTGGVPQTPK
GTEGTPNLIHFHRTFVQQPQLLSSPSLRCLPRKSSLSLEPPPVTRSARFSLLHFPPTATI
DATLGYSSDRDCTWDRGFRVPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELSKFEKNF
YQEHPDLARCTAQEGETYRRSKEITVRGHNCPKPVLNFYEANFPPNVMDVIARQNFTEPT
AIQAQGWPVALNRLDMVGVAETGPGKALSYLMPAIVHINHQPLLERGDGPICLVLAPTRE
LAQQVQQVAAVYCRACCLKSTCIYRGAPKGPQICYLERDVEICIATPGRLTDFLECGKTN
LRRTTYLVLDEADRMLDMGFEPQIRKIVDXIRPDRQTLMWSATWPKEVRQLAEDFLKDYI
HINIGALELSANHNILQIVDVCHDVEKEEKLIHLMEEIMSEKMIKTIVFVETKRRCDELT
RKMRIDGWPVMGIHGDKSKQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDY
PNSSEDYIHRIGRTARSTKTGTAYTFFTPDNIKQVSDLISVLREANQAINPKLLQLVEDR
GSGRSRGRGGMKDDHRDRYSVGKRGGFNTFRDRENYDXGYSSLLKRDFGAKTQNGVYSAS
DYTNGSSGSNFVSAGIQSSFRTGNPTGTYQNGYDSTQQYGRNIPNMHNGMNQQAYAYPAT
TAAPIGYPMPIGYSQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcctacctcatttttgaaatatcagcaggaaggacatctcaagaacaaaagaaagtta
aaaagaactaatcagagggtggggcggagtcaagatggcagactaggaggacgtggaatt
cgtgtattcgcacaactagggcacctaccaggcaccggtggggtaccacagacaccaaag
gggacggaaggaacccctaacctcattcatttccaccggacttttgtgcagcagccccag
ctcttgtcatcgccatccctccgctgcctcccccgcaagagttcgctgtcgctggagcca
cctccggttactcgtagcgctcgattctctctgcttcacttcccaccaaccgcaaccatt
gacgccacgttgggttattcgagtgaccgagactgcacctgggatcgagggtttcgtgtc
cctcgatttggaggaagtagggcagggccgttatctggaaagaaatttggaaaccctggg
gagaaactggttaaaaagaagtggaatcttgatgagctgtccaaatttgagaagaatttt
tatcaagaacaccctgatttggctaggtgtacagcacaagagggagagacatacagaaga
agcaaggaaattacagttagaggtcacaactgcccaaagccagtactgaacttttatgaa
gcgaacttccctccaaatgtcatggacgtgattgcaaggcagaactttactgaacccaca
gctattcaagctcagggatggccagttgctctaaatagattggatatggttggggtagca
gaaactggacctgggaaggcgttgtcttatttgatgcctgccattgtccacatcaatcat
cagccgctcctagagagaggtgacggacctatttgcttggtgctggcaccaactcgggaa
ctggcccaacaggtacagcaagtagctgctgtatactgtagagcatgttgcttgaagtcc
acttgtatttatcgtggtgctcccaagggaccacaaatatgttatttggagagagatgta
gaaatctgtattgcaacacctggaagacttactgactttttagaatgtgggaaaaccaat
ctaagaagaaccacctatcttgtccttgatgaagcagacagaatgcttgatatgggattc
gaacctcaaataaggaagattgtggattagataagacctgataggcaaaccctaatgtgg
agtgctacttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatatt
catataaacattggtgcactagaactgagtgcaaatcacaacattcttcagattgtggat
gtgtgtcatgatgtagaaaaggaagaaaagcttattcatttaatggaagagatcatgagt
gagaagatgattaaaaccattgtttttgttgaaaccaaaagaagatgtgatgaactcact
agaaaaatgaggatagatgggtggcctgtcatgggtatccatggtgacaagagtaaacag
gaacgtgactgggttctaaatgaattcaaacatggaaaggctcctattctgattgctaca
gatgtggcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactac
cctaactcctcagaggattacattcatcgaattggaagaactgctcgcagtaccaaaaca
ggcacagcatacactttctttacacctgataacataaagcaagtgagtgaccttatctct
gtgcttcgtgaagctaatcaagcaattaatcccaaattgcttcagttggtcgaagacaga
ggttcaggtcgttccaggggtagaggaggcatgaaggatgaccatcgggacagatactct
gttggcaaaaggggtggatttaatacatttagagacagggaaaattatgacnnaggttac
tctagtctgcttaagagagattttggggcaaaaactcaaaatggtgtttacagtgcttca
gattacaccaatgggagctctggaagtaattttgtgtctgctggtatacagagcagcttt
aggactggtaatccaacagggacttaccagaatggatatgatagcactcagcaatatgga
cgtaatattcccaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctact
acagctgcgcctattggttatccaatgccaataggatattctcaataa
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