KEGG   Orcinus orca (killer whale): 117196045
Entry
117196045         CDS       T05247                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03020  RNA polymerase
oor03420  Nucleotide excision repair
oor04623  Cytosolic DNA-sensing pathway
oor05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117196045
  09124 Replication and repair
   03420 Nucleotide excision repair
    117196045
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117196045
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    117196045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oor03021]
    117196045
   03400 DNA repair and recombination proteins [BR:oor03400]
    117196045
Transcription machinery [BR:oor03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117196045
  RNA polymerase III system
   RNA polymerase III
     117196045
  RNA polymerase I system
   RNA polymerase I
     117196045
DNA repair and recombination proteins [BR:oor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117196045
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 A2L_zn_ribbon MCM_OB DUF5816 DmmA-like_C Cytochrome_C7 HypA DZR NCD3G
Other DBs
NCBI-GeneID: 117196045
NCBI-ProteinID: XP_033258973
LinkDB
Position
5:complement(67553812..67554241)
AA seq 58 aa
MDTQKDVQLPNQQPMIYICGECHTENEIKSRDPIQCTECGYRIMHKKRTKRLVFFDAQ
NT seq 177 nt   +upstreamnt  +downstreamnt
atggacacccagaaggacgttcaactcccaaatcaacagccaatgatatatatctgtgga
gaatgtcacacagaaaatgaaataaaatcaagggatccaatccaatgcacagaatgtgga
tacagaataatgcacaagaaaaggactaaaagattggtgttttttgatgctcaatga

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