KEGG   Orcinus orca (killer whale): 117196053
Entry
117196053         CDS       T05247                                 
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04390  Hippo signaling pathway
oor04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:oor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    117196053 (SOX2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    117196053 (SOX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oor03000]
    117196053 (SOX2)
Transcription factors [BR:oor03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    117196053 (SOX2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 117196053
NCBI-ProteinID: XP_049566612
LinkDB
Position
5:63917396..64038217
AA seq 326 aa
MYNMMETELKPPGPQQTSGGGGGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYR
PRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSY
SMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQG
TPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSR
LHMSQHYQSGPVPGTAINGTLPLSHM
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggc
ggcaaccagaagaacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtgg
tcccgcgggcagcggcgcaagatggcccaagagaaccccaagatgcacaactcggagatc
agcaagcgcctgggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatc
gacgaggccaagcggctgcgagcgctgcacatgaaggaacacccggattataaataccgg
ccccggcggaaaaccaagacgctcatgaagaaggataagtacacgctgccgggagggctg
ctcgccccgggcggcaacagcatggcgagcggggtcggggtgggcgccggcctcggcgcg
ggcgtgaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggcagctac
agcatgatgcaggaccagctgggctacccgcagcacccgggcctcaacgcgcacggcgcc
gctcagatgcagcccatgcaccgctacgacgtgagcgccctgcagtacaactccatgacc
agctcgcagacctacatgaacggctcgccgacctacagcatgtcctattcgcagcagggc
acccctggcatggctcttggctccatgggctcggtggtcaagtccgaggccagctccagc
ccccccgtggttacctcttcttcccactccagggcgccctgccaggccggggacctccgg
gacatgatcagcatgtacctccccggcgccgaggtgccggagcccgccgcccccagcaga
cttcacatgtcgcagcactaccagagcggcccggtgcccggcacggccattaacggcaca
ctgcccctctcgcacatgtga

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