KEGG   Orcinus orca (killer whale): 117201235
Entry
117201235         CDS       T05247                                 
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04144  Endocytosis
oor04517  IgSF CAM signaling
oor04530  Tight junction
oor04666  Fc gamma R-mediated phagocytosis
oor04810  Regulation of actin cytoskeleton
oor05100  Bacterial invasion of epithelial cells
oor05132  Salmonella infection
oor05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:oor00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117201235
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117201235
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117201235
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117201235
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagocytosis
    117201235
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117201235
   05135 Yersinia infection
    117201235
   05100 Bacterial invasion of epithelial cells
    117201235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    117201235
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oor04812]
    117201235
Membrane trafficking [BR:oor04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    117201235
Cytoskeleton proteins [BR:oor04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     117201235
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR5 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_RIG_2nd WD40_CDC20-Fz WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 EIF3I
Other DBs
NCBI-GeneID: 117201235
NCBI-ProteinID: XP_033283849
LinkDB
Position
X:complement(15879719..15880671)
AA seq 316 aa
MPGTGIVQIALSPNNHEVHIYKNGSQWVKAHEFKEDNRHITGIDWAPKSDRIVTCRADHN
AYVWGQKGGVWKPTLVILRINCAAAFVKWSPRENKFAAGSRAQLISVCYFESENDWWVSK
HIKKPIRSTVASTPWGSKMPFGQLMSEFGGSGTGGWVNGVSFFASGSRLAWVSHDGTVSV
VDASKSVQVSTLKTEFLPLLSVSFGSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDLPK
ESIQRNMSAMEHFHNTDKWAMTKDRNTALETLHQNSITQVSIYEVDNQDCRKFCTTGIDG
AMTIWDFKTLESRAFG
NT seq 951 nt   +upstreamnt  +downstreamnt
atgcctggaacagggatcgtacagattgcccttagccccaataaccatgaagtccacatc
tataagaacgggagccagtgggtgaaagctcatgagttcaaggaggacaacagacacatc
acaggtatcgactgggctcccaagagtgaccgcattgtcacttgtagggctgaccacaat
gcctacgtctggggtcagaaaggtggagtttggaagccgaccctggtgatcctgagaatt
aactgcgcagccgcttttgtcaagtggtccccgcgagagaacaaatttgctgcgggcagc
agagcacaactcatttctgtttgttacttcgagtcagaaaatgactggtgggtaagcaag
cacataaaaaaacccattcgctccacggtcgccagtacaccctggggcagcaagatgcct
tttggtcagctgatgtcagagtttggtggcagtggcactggcggctgggtgaacggggtc
agcttctttgccagcgggagccgcctggcctgggtcagccacgacggcaccgtgtctgtt
gttgatgcctcaaaaagcgtgcaggtctcaactctgaagacagagttcctgcccctcctg
agtgtgtcgttcggctcagagaacagcgttgtggctgctggccatgactgctgccccatg
ctctttaactacgacgaccgtggctgcttgaccttcgtctccaagctagacctcccgaaa
gagagcatccagcgcaacatgtcggccatggagcacttccacaacacggacaagtgggcc
atgaccaaggaccgaaacacagccctggagacgctgcaccagaacagcatcactcaagtg
tctatttatgaggtggacaatcaagattgtcgcaaattttgcactactggcattgacgga
gccatgaccatttgggatttcaagaccttagagtccagggcctttggataa

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