Oratosquilla oratoria (Japanese mantis shrimp): 143017896
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Entry
143017896 CDS
T11268
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oot03041
]
143017896
03016 Transfer RNA biogenesis [BR:
oot03016
]
143017896
Enzymes [BR:
oot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143017896
Spliceosome [BR:
oot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
143017896
Transfer RNA biogenesis [BR:
oot03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
143017896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
143017896
NCBI-ProteinID:
XP_076029050
LinkDB
All DBs
Position
33:46952240..47041207
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AA seq
737 aa
AA seq
DB search
MTAFEEMGVMPEIAKAVEEMDWTLPTDVQSEAIPLVLGGGDTLMAAETGSGKTGAFCLPI
LQIVWETLKDIQQGKSNKVNKEVSPHWLLSFFDRDTGMAVTPDGLRCQSREPKAWQGVRC
TKGVTGKGKYYYEATVSDEGLCRVGWSTRQAALDLGTCKWGFGFGGTGKKSNCRQFDDYG
EAFGLHDVIGCYLDMEGMEMRYSKNGVDLGKAFSLRSDFKNATLFPSCVLKNAEMAFNFG
AQPFKHPPKNGYIAVCEATKECIVNSDVKGAGGDQKMKVINNAPQAIIIEPSRELAEQTL
KQIQLFRKHLDNPVVKDLLIVGGVPVKDQISALNGGIDIVSGTPGRLEELINTGQLSLQG
CRFFVLDEADGLLKQGHENLINRIHSAIPKITPDGKRLQMVVCSATLHSFEVKRMAERLM
HFPTWIDLKGQDSVPETVHHVVVKVDPRNNQSWTNLRKHVQTDGVHSRDNVRPGNNTPET
LSEAVKMMKGELCIKAIDTHKMDQALIFCRTKLDCDNMERYMNQLGGGPKNRNNPYSCVC
LHGDRKPHERKANLECFKRKEVKFLICTDVAARGIDVGGLPFMINITLPDEKSNYVHRIG
RVGRAERMGLAISIVSDVPEKVWYHGEWCATRGRNCHNTRLTTESGCCVWYNEPQYLADI
EEHLGVTIQQVDEDMKVPLDEFDGKVSYGAKRAQMGSNYQTHVEQLAPAVHELQELERDA
QQIYLKRQYGKEYPWTR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagagatgggtgtgatgccagaaattgcgaaggcagtagaggaaatg
gactggactctaccaacagatgttcagtctgaagcaattcctcttgtcctgggaggtgga
gacacactcatggcagctgagactggtagtggtaagacaggagcattctgtctccccatc
ctccagattgtgtgggaaaccctcaaagatatacaacaaggaaaatcaaataaagttaat
aaagaagtttccccacactggcttctaagcttctttgatagagatactgggatggctgta
acaccggatggcttacgctgtcagtcccgtgagcccaaagcctggcagggtgtccggtgc
acaaagggtgttactgggaagggaaaatattactatgaagcaactgtatctgatgaagga
ttgtgtcgagttggctggtcaacaagacaggctgcacttgacttgggtacctgcaagtgg
ggctttggctttggaggtacaggcaagaaatccaattgtcgtcagtttgacgactatggt
gaagcttttggtcttcatgatgtgatagggtgttaccttgacatggagggtatggagatg
aggtattccaagaatggtgttgacctgggtaaagcattttcactgagaagtgactttaag
aatgctactctcttcccatcatgtgttttgaagaatgcagaaatggccttcaattttggt
gcacaacccttcaagcatccccccaaaaatggttacattgctgtttgtgaggccaccaaa
gaatgcattgtcaacagtgatgtcaaaggagcaggaggtgatcagaagatgaaggttata
aataatgcaccacaggctatcattattgagccttcccgtgagttagctgaacaaaccctg
aaacagatacaacttttccgtaagcacctagataatcctgttgtcaaggatcttctcatt
gtgggtggtgttcctgtgaaggatcaaatatcagctctaaatggaggtattgatattgta
agtgggactcctggacgtttggaggagctgatcaacactgggcagctctcccttcagggc
tgcaggttcttcgtacttgatgaagctgacgggctcttgaaacagggccatgagaatctt
atcaacagaattcacagtgccattcctaaaatcactcccgatgggaaacgtcttcagatg
gtggtgtgttcagctacgttacattcctttgaagtcaaacgtatggcagaacgtttgatg
cacttcccaacatggattgacctgaagggacaggactctgttcctgagacagtgcaccat
gttgttgtgaaggtggacccacgtaacaaccagtcgtggaccaatctgaggaagcatgtc
caaacagatggagtccacagtcgggataacgtccggccaggcaataatacaccagagacc
ttgagtgaagcagtgaaaatgatgaagggtgaactgtgtatcaaagccatcgacacacac
aagatggaccaggctctcatcttctgtcgcaccaagcttgactgtgacaacatggaacgc
tacatgaatcaattgggtggaggacccaagaatcgtaataacccttactcctgcgtctgt
ctccatggtgaccgtaaaccacacgaaaggaaggccaatttggaatgctttaaaaggaaa
gaagtcaaattcctcatctgtactgatgtggcagcaagaggcatagatgttggagggctt
ccattcatgatcaacatcaccttaccagatgagaagagcaattatgtgcatcgtattgga
cgtgttggtcgagcagagcgaatgggtcttgccatctccattgtttcagatgtgcctgag
aaggtttggtaccacggggaatggtgtgctacacgaggccgcaactgccacaacacacgt
cttaccacagaaagtggctgctgcgtctggtacaatgaacctcagtaccttgctgatatc
gaggagcacttgggtgtgacaatccagcaagtggatgaagacatgaaagttcctttggac
gaatttgatggcaaggtcagctatggtgccaaacgagctcagatgggttcaaactaccaa
acccatgtggaacagctggctccggcagtacatgaattgcaagaattggaacgagatgca
cagcaaatctacctcaagaggcaatacggcaaagaatacccttggactcgttaa
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