Oratosquilla oratoria (Japanese mantis shrimp): 143019989
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Entry
143019989 CDS
T11268
Symbol
Prp8
Name
(RefSeq) pre-mRNA processing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143019989 (Prp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oot03041
]
143019989 (Prp8)
Spliceosome [BR:
oot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
143019989 (Prp8)
Complex C
U5 SnRNP specific factors
143019989 (Prp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
143019989
NCBI-ProteinID:
XP_076032187
LinkDB
All DBs
Position
38:16883397..16910551
Genome browser
AA seq
2373 aa
AA seq
DB search
MAIPPYLIPGSPWAFMAQQQAHLAAAQAQAAHAQMQAHFQAQAQAQAQAQPRQQQGPPPV
ENISMEKMQEKARRWQQLHNKKYAEKRKFGFVDVQKEEMPPEHIRKIIRDHGDMSSRKYR
HDKRVYLGALKFMPHAVLKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVIEPAYIS
QWSTMWMMMRREKRDRRHFKRMRFPPFDDEEPPLDFADNVLDVEPLEAIQIELDPEEDGE
VMEWFYEHKPLLDTKHVNGPTYRKWKLSLPQMATLYRLANQLLTDVSDNNYFYLFDLKSF
FTAKALNMALPGGPKFEPLIKDMNPADEDWNEFNDINKIIVRHQVRTEYRIAFPYLYNNM
PQYVHLSWYHTPTILYIKTEDPDLPAFYFDPLINPISHRNAVKGETLLPDDDEDFELPED
IEPVLKEWPMYTDNTANGIALLWAPRPFNMRSGTMRRAIDVPLVKSWYREHCPPGQPVKV
RVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQTTTLDWVEVGLQVCRQGYNM
LNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQ
YRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGQVGK
GPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDL
ELRASVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYV
KMKADWWTNTAHYNRERIRRGATVDKTVCKKNMGRLTRLYLKAEQERQHNYQKDGPYISP
EEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREE
LGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLD
QYLWYEADKRRLFPPWVKPGDSEPPPLLVYKWCQGINNLMDVWDTAEGECNVMLESKFEK
MYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVDINYKDMNHTNRYGIIRGLQFASFIVQY
YGLVLDLLVLGLRRAADMAGSPQMPNDFLNFQDVATETQHPIRLYSRYIDRIHIYFRFTA
EEAKDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPR
SVTTINWENSFVSVYSKDNPNLLFNMSGFECRILPKCRMTHEEFKHRDGVWNLQNEVTKE
RTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYYREAVVNTQE
LLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWS
KQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWETEFLDSQRVWAEYALKRQEATAQNRRL
TLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGK
LWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR
SGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ
KIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNYSKPS
LLADSKDSMDGSTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSLYPSPTGVLI
AIDLAYNLHSAYGNWFPGAKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYL
SSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIH
TSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIV
IKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKNISSYTAFSRLILILRAL
HVNNDRTKVLLKPDKTTITEPHHIWPSLTDEEWVKVEVQLKDLILADYGKKNNVNVASLT
QSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYE
TATFSSKTEWRVRAISATNLHLRTNYIYVSSDDIKETGFTYILPKNVLKKFIIISDLRTQ
IAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQMVHLPHKLPGHDFLNELEPLGWIHTQPN
ELPQLSPHDITTHATIMADNGSWTTDRTIVITCSFTPGSCSLQAYKLTPSGFEWGRNNKD
MGNNPKGYLPSHYEKVQMLLSDRFLGLFMTPLQGSWNYNFMGVRHDPNMKYDLQLSSPKE
FYHEVHRPAHFLNFSSLDEGDTIAGADRDNSLE
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccaccatatttaataccgggcagcccctgggcctttatggcgcagcagcag
gcacaccttgctgcagcccaggcccaggctgctcatgcccagatgcaggcacactttcaa
gcccaggcacaggcccaggctcaggcccagcccagacagcaacaaggccctcctcctgtg
gagaatatatcaatggagaagatgcaggagaaagcccgaagatggcaacaactacacaac
aagaaatatgctgagaaaagaaagtttgggtttgtcgatgtgcagaaggaagagatgccc
ccagagcacatccgcaagattattcgggatcatggggacatgtccagtcgcaagtaccga
catgacaagagagtgtacttaggtgccctcaaatttatgccacatgctgtattgaagttg
ttggagaatatgcccatgccttgggagcaaataagagatgtgcaggtgttgtatcacatt
actggtgccatcacttttgtaaatgaaattccatgggtcattgaaccagcctacatttct
caatggtcaaccatgtggatgatgatgagacgagagaagagagatcgaagacatttcaaa
cgcatgaggtttccaccttttgatgatgaagaacctcctttagattttgcagacaacgtt
ttggatgtagagcctctagaagccattcagattgaattagacccagaagaagatggagaa
gttatggaatggttttatgagcacaaacctttacttgacaccaaacatgtcaatggacct
acctaccgcaagtggaagctctcactccctcagatggccacattgtacagattggccaat
caacttctcacagatgtttccgataacaactacttctacttgtttgatttaaaatcattc
ttcacagctaaggctctcaatatggcacttcccggtggccccaaatttgaacctttgata
aaagacatgaatccagctgacgaagactggaacgagttcaatgacatcaacaaaatcatt
gtgaggcaccaagtacgcacagagtaccgcattgccttcccatatctgtacaacaacatg
ccacaatatgtgcatctcagctggtaccacaccccaaccattctctacattaagactgag
gatccagatctgccagccttttactttgatccactcattaatccaatttcacatcgtaat
gcagtgaagggtgaaacactcttgccagatgatgatgaggactttgagttaccagaggat
atagaaccagtgttgaaggagtggcccatgtacacagacaacactgccaatggcattgca
ctgctgtgggctccccgtcctttcaacatgcgatcaggcacaatgaggagggccattgat
gttcctttggtgaagtcatggtacagagagcattgccctccaggacaaccagtaaaggtt
cgagtgtcctatcagaagttgttgaagtactacgtcctgaatgccctcaaacatcggcca
ccgaaagcccagaagaaacgatacctattccgatccttcaaagctaccaagttcttccag
acgacaacacttgactgggttgaggttggcttgcaagtatgccgtcaggggtacaacatg
ttgaatctcttgatccatcgcaaaaacctgaattacttgcatttggattacaacttcaat
ctaaaaccagttaagacgctcactaccaaagagcgaaagaagtctcgattcggtaatgcg
ttccatttgtgtcgtgagatcttgagactgaccaagttagtagttgatgcccatgttcag
tatcgtctgaataacgttgatgccttccaactggcagatgggctacagtacatatttgct
catgtgggtcaacttactggtatgtacagatacaagtacaaattaatgagacaaattaga
atgtgcaaagatttaaagcatgtgatctattacagatttaacacagggcaagtaggtaaa
ggacctgggtgtgggttctgggcccctggttggagagtgtggctctttttcatgagagga
atcactcctcttctggagagatggcttggtaacctgctctcccgtcagtttgagggacga
cacagtaaaggtgtggcaaaaacagtgaccaaacagagggtagagtcacacttcgatctt
gagctccgtgcgtctgtgatgcatgatattttagacatgatgcctgagggaatcaagcag
aacaaagcaagaacgattctgcagcatctctctgaggcatggaggtgttggaaggcaaac
attccctggaaggttcctgggttgcccacacccattgagaacatgattctaagatatgtc
aagatgaaagccgactggtggacaaatacagctcattacaaccgtgagcgtatcaggcgt
ggtgctactgttgacaaaactgtatgtaagaagaacatgggacgtctcacaagattgtac
ctgaaggctgagcaggagagacagcacaattatcagaaggatggtccatacatcagccct
gaagaggccgtagccatatacacaaccactgtgcattggctggagtcccgtaggtttgct
ccaattccattccctcctttgtcatacaagcatgacacaaagctccttatcttggccctt
gaaagactaaaggaagcatacagtgtaaagtctcgactaaaccagtcacagcgtgaagag
ctgggtcttattgagcaggcttatgacaatcctcacgaggctctgtctcgtatcaagcgt
catctactcacccagagagcattcaaggaggttggtattgagtttatggatctttacagc
catcttatccctgtatatgatgtagaaccactggaaaaaattacagatgcctacttggac
caatacttgtggtatgaggctgataaacgtcgcctcttcccaccttgggtcaagcctgga
gactcagaacccccaccattgttagtgtacaagtggtgccagggaatcaacaaccttatg
gatgtatgggatactgctgaaggagaatgcaacgttatgttggagtctaaatttgaaaag
atgtacgagaagattgatttgactcttctcaacaggcttttgcgtctgattgtcgaccac
aacattgctgattacatgacagccaaaaacaatgtagacatcaactacaaggatatgaac
cataccaatcgatatggtatcatcaggggtctccagtttgcttccttcattgtacagtac
tatgggctcgtgcttgaccttctagttttgggtttgaggcgagcagcagatatggcaggt
tccccacagatgcccaacgacttcctcaacttccaagatgttgcaacagaaacgcagcat
cccatcaggttgtattcaagatacatagacagaattcacatttacttcagattcactgct
gaagaagccaaggacctcattcagagatatctaactgaacatccagatcccaacaatgag
aatattgttggatacaataataagaaatgctggccaagggatgcaagaatgaggctgatg
aagcatgatgtcaatttaggaagagccgtgttctgggacatcaagaaccgtttgccaagg
tcagtgaccaccatcaactgggagaactcctttgtgtctgtctattccaaggacaacccc
aaccttttgttcaacatgagtgggtttgaatgtcgtatcttgccaaagtgccgcatgact
cacgaagaattcaagcacagagatggagtatggaatctccagaatgaggtgaccaaagaa
agaactgctcagtgtttcctgcgtgtggatgacgagtccatgcagaggttccacaacagg
gtgcgtcaaatcctgatggcctctggttcaaccacatttactaagattgtaaataagtgg
aacactgcactgattgggcttatgacctactatcgtgaggcagtagtaaacacacaggaa
cttctagacctcctcgtgaagtgtgagaacaagattcagacacgtatcaagattggtctc
aattcaaagatgccctcgagattccctcctgttgtgttctacactccaaaggagttgggt
gggttaggtatgttgtctatggggcatgttctcattcctcaatctgatttgcgatggagc
aagcagacagatgtaggtatcacacatttcagatctggcatgagtcatgatgaagatcag
ctcattcctaacttgtacaggtatatccaaccctgggaaacggagttcctggactcgcag
agggtttgggcagaatatgccctgaaacgtcaggaggcaacagcacagaatagacgtctg
acattggaagatctcgaagattcttgggatcggggtataccaagaatcaacacccttttc
cagaaggatcgacacacacttgcctatgacaagggctggaggattcgtactgaattcaaa
cagtatcaggttcttaaacaaaatcctttctggtggacacatcagcgccatgatggtaaa
ttgtggaatctcaacaactacagaacagacatgatccaggcattgggtggagtagagggt
atcttggaacacacactcttcaaaggaacttacttccccacgtgggagggtctcttctgg
gaaaaggcctcaggttttgaggagagcatgaagtacaagaaactgacaaatgctcaacgt
tctggtctgaatcagattcccaaccgtcgcttcacactttggtggtctcccacaatcaac
cgtgctaatgtgtatgtaggtttccaggtgcagcttgatcttactgggatcttcatgcat
ggcaaaatcccaacactgaagatctccctcattcagatattccgtgctcacttgtggcag
aagatccacgaatcagttgtgatggacttgtgtcaggtgtttgatcaggaacttgatgcc
ttagagattgaaactgtacaaaaagagactattcaccctaggaaatcttacaaaatgaac
tcctcctgtgcagatattcttctttttgcagcctacaagtggaattactccaaaccttcc
ttgttggcagactcaaaggattccatggatggctccactacacagaagtactggattgat
gttcagcttcgttggggtgattacgattcccatgatattgaaaggtatgctagggcaaag
ttccttgactacaccacagacaatatgtcactgtacccatccccgacaggtgttctgatt
gccattgatttggcgtacaatcttcacagtgcatatggcaattggttcccgggggccaag
cctcttatccagcaggcaatggctaaaattatgaaagccaacccggccttgtatgtgctt
cgtgaacgcatcagaaagggcctgcaactgtattcatcagaaccaactgaaccttacctt
tcctctcagaattatggtgaactcttctccaaccagatcatttggtttgtagacgacacc
aatgtgtaccgtgtcaccattcacaagacctttgaaggtaatcttacaacaaagcccatc
aacggtgccatcttcatcttcaatccacgcacagggcaactcttcctaaagatcattcac
acttcagtttgggcaggtcagaagcgtctaggtcagttggctaagtggaagactgctgag
gaagttgctgcccttatcagatctcttccagttgaagaacagcctaaacagatcattgta
accagaaaaggtatgttggatccccttgaggtacatttgcttgatttccccaatattgtc
atcaaaggatcagaattgcagcttcctttccaagcttgtctcaaagttgagaagtttggt
gatcttattctgaaggctacagaacctcagatggttctcttcaacctctatgatgattgg
ctaaagaacatctcgtcatacacagcattctccaggctgattcttattctcagggccctt
catgttaacaatgaccgcacgaaggttttgcttaagccagacaagacaacaatcacagaa
cctcaccacatctggccttcccttacagatgaggagtgggttaaggtggaggtgcagttg
aaggatttgattctagctgattacggtaagaagaacaatgttaatgttgcatctctgaca
cagtctgaaattcgtgatatcatcctgggtatggagatcagtgctccatctgctcagaga
cagcaaattgctgagattgagaaacagaccaaagaacagagtcagctgactgccacaaca
acacgcactgtgaataaacatggagatgagatcattacatccaccacgagcaactatgag
actgctacgttcagcagcaaaacagagtggcgagtgcgtgccatttctgctaccaacctt
catcttcgtactaattatatttatgtatcgtcagatgatatcaaggaaacaggcttcaca
tatatcttgcccaagaatgtgttaaagaagttcatcatcatatctgatctcagaacacag
attgctggatacttgtatggtgtaagcccacctgacaacccacaagtgaaagaaatcagg
tgtattgttatgccaccacagtggggtacccatcagatggttcacctgccccacaaactg
cctggccatgacttccttaatgaattggagcctctaggatggatccacacacagccaaat
gaattaccacagctatccccacatgatattacaacccacgcaacaatcatggcagacaat
ggctcctggactactgacaggacaattgtgatcacttgctccttcacaccagggtcatgt
tccctccaagcatacaagcttaccccctccggttttgagtggggcagaaacaacaaggat
atgggcaataatccaaagggttacttgccctcccactatgagaaagttcaaatgcttctg
tcagatcggttcctgggtctcttcatgacgccacttcaaggatcttggaattacaacttc
atgggtgttcgtcatgatcccaacatgaaatacgaccttcagttgtccagtcctaaagag
ttttaccatgaagtacacagacctgcacacttccttaatttctcatctttagatgaaggt
gataccatagctggggcagacagagacaattctcttgagtag
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integrated database retrieval system
