Oratosquilla oratoria (Japanese mantis shrimp): 143022078
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Entry
143022078 CDS
T11268
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
143022078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oot03009
]
143022078
Ribosome biogenesis [BR:
oot03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
143022078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_5
AAA_22
AAA_16
AAA_28
Mg_chelatase
RuvB_N
TsaE
AAA_33
RNA_helicase
AAA_14
AAA_18
IstB_IS21
NACHT
AAA_2
Rad17
TIP49
nSTAND_NTPase5
ATPase
AAA_7
Sigma54_activat
nSTAND3
AAA_24
DUF815
Zeta_toxin
NPHP3_N
Parvo_NS1
Vps4_C
AAA_25
ABC_tran
AAA_17
T2SSE
AAA_29
DEAD
Motif
Other DBs
NCBI-GeneID:
143022078
NCBI-ProteinID:
XP_076036145
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All DBs
Position
43:complement(14297289..14504427)
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AA seq
777 aa
AA seq
DB search
MKEPYFLERSLPIRVEKYMNDNEYIDVEEMTEYLMNNYREFQSKNKKPFMKCVQKAYEWQ
MYKRRKNGEIQSNTSNDAIILDQEDEVIFEKESKNSVTSSVMQKLYKKDKACASPGRYSK
ASSIDDDEDCNFPAEIQQVSSKKRKKKVDQDIEDLIKRKKKRDLIPEHITATFSDMAGIE
KLKDKIGDLLANLHYPGVLKPLQKSMLLTGPTGSGKTMFAQALAGTSNVPLFRITATELV
GGVSGESEERVKDTFEQAAAMAPCIMLLEKIDVISPKEGSSKSMERRMGAQLSSCLQLLR
SKFKDKKMLVFGETSHAENLEWDIRSSFDDEMFMSVPDESARYKILQLLCKESPHINLDE
IAHRTPGYMPGDLKRLSDKAQGIAWKRKRDTIFNSIPSKNFTEQLQTFLEEFGKMCGDEQ
QCMVEVNMEDFMEALLQVTPALKREGFPTVPDVTWQDIGGLDDIKKELREKILEPIRFAK
LHEEYGARRPNGILMWGPPGCGKTLLAKAVANEAGINLLPVMGPELLNMYQGESERAVRE
VFHKAASVAPCVIFFDEFDSLCPVRTKGAESGSKTTIVNTLLTEMNGFQDRKDVYVIGAT
NRPDILDPAITRPGRFDTLLYVGLPDYDARIAVLSARTKNGTCPKLSSDVKLPEIARMCD
NFSGADCDQLVYLASKEAIREVITANDLQNTSSQEAEKLQSHFHLVSKKHFSTALKRIKP
SVSIEEQRRYRKLHSSLGMKKFVEGLDDETHKSACVGENTAVESSSSSDINSGLHIK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaccgtattttttggaaagaagtttgcccattagagttgagaagtatatgaat
gacaatgagtacattgatgttgaagaaatgacagaatatctcatgaacaactacagggaa
tttcaatcaaagaataagaagccatttatgaagtgtgttcagaaagcatatgagtggcag
atgtataaaagaaggaagaatggtgaaattcagagtaataccagtaatgatgcaatcatc
cttgatcaagaagatgaagtgatttttgagaaagagtccaagaacagtgtgaccagttca
gttatgcagaaactctataaaaaagacaaagcatgtgcctcgccaggaaggtattccaaa
gcctcttccatagatgatgatgaagactgcaattttcctgctgaaatccaacaggtgagt
tccaagaagcggaaaaagaaggtggaccaagatattgaagaccttattaaacgaaaaaag
aaaagggatctaataccagagcatattacagcaacattttcagatatggctggcattgag
aagttaaaggataaaattggtgatttacttgccaacctacactatcctggagtactgaaa
cctctacaaaagagcatgctgcttactggacctacaggaagtggaaaaacaatgtttgca
caggcattggctgggacatcaaatgtccccttattccgcatcactgccacagaattggtg
ggaggggtgtctggggagagtgaggaacgagtgaaagatacctttgagcaggcagctgcc
atggctccctgtattatgctgctggaaaagattgatgtcatttcaccaaaggagggatca
tctaagagcatggagagaaggatgggtgctcagttatcttcttgtttgcagttactcaga
tctaaattcaaagacaagaaaatgctggtttttggagagacaagccatgcagaaaacttg
gagtgggacattcgaagcagttttgatgatgaaatgtttatgtctgtgccagatgaatct
gcaaggtacaagattctacagttgctgtgtaaggaaagtccccacataaacttagatgaa
atagcccatcgcaccccaggatacatgccaggggaccttaaaaggctgtcagataaagcc
caagggattgcatggaaaagaaaaagagataccattttcaactccatcccatcaaagaac
ttcacagaacagctacagacattcttagaggagtttgggaaaatgtgtggagacgaacaa
cagtgtatggttgaagttaacatggaagatttcatggaggctttattgcaagtcactcca
gcactaaagcgtgaaggcttcccaacagttccagatgtaacttggcaagatataggagga
ttagatgatatcaagaaggaattgcgtgagaagattctagaaccaataagatttgccaaa
ttacatgaagaatatggagcaagaagacctaatggtatcctaatgtggggacctccaggt
tgtggcaaaactctgctggcaaaggctgtggctaatgaggctggaatcaatctcttacct
gtgatgggacctgaacttctcaatatgtaccagggtgaaagtgaaagagcagtgcgtgaa
gttttccacaaagcagccagtgttgctccatgtgtcattttctttgatgaatttgattct
ttgtgtccagtcagaactaaaggagcagagagtggtagtaagacaaccattgtcaacacc
ctgttgacagaaatgaatggcttccaggaccgcaaggatgtttatgtcatcggtgccact
aatcgtccagatatacttgacccagctatcacaaggccaggacgatttgacacactgctt
tatgttggtttacctgactatgatgcaagaatagcagtattaagtgctagaactaagaat
ggaacgtgccccaagctctccagtgatgtaaaattgccagaaatagcaagaatgtgtgat
aatttctctggtgctgattgtgatcaattagtttatttagctagcaaagaagcaatcaga
gaggtaatcacagctaatgatctacagaatacaagttcacaagaggcagagaaacttcaa
tctcattttcatcttgtgtctaaaaaacatttttcgactgctttaaagaggatcaagcct
tcagtttcaatagaggaacagcgacgttacagaaagctgcacagcagcttgggaatgaag
aaatttgttgaaggattggatgatgaaactcacaagtctgcttgtgtgggagaaaataca
gctgtagagtcatcaagcagttcagatatcaattctggcctacacattaagtga
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