Oratosquilla oratoria (Japanese mantis shrimp): 143022408
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Entry
143022408 CDS
T11268
Symbol
RfC3
Name
(RefSeq) replication factor C subunit RfC3
KO
K10756
replication factor C subunit 3/5
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03030
DNA replication
oot03410
Base excision repair
oot03420
Nucleotide excision repair
oot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143022408 (RfC3)
03410 Base excision repair
143022408 (RfC3)
03420 Nucleotide excision repair
143022408 (RfC3)
03430 Mismatch repair
143022408 (RfC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oot03032
]
143022408 (RfC3)
03036 Chromosome and associated proteins [BR:
oot03036
]
143022408 (RfC3)
03400 DNA repair and recombination proteins [BR:
oot03400
]
143022408 (RfC3)
DNA replication proteins [BR:
oot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
143022408 (RfC3)
DNA Replication Termination Factors
ELG1-RFC complex
143022408 (RfC3)
Chromosome and associated proteins [BR:
oot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
143022408 (RfC3)
DNA repair and recombination proteins [BR:
oot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
143022408 (RfC3)
Check point factors
HRAD17(Rad24)-RFC complex
143022408 (RfC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_14
AAA_11
AAA_24
AAA_assoc_2
RuvB_N
ResIII
AAA_16
DEAD
AAA_5
AAA_30
DUF815
BrkDBD
AAA_7
RCF1-5-like_lid
AAA_19
PhoH
Mg_chelatase
Cas_NE0113
Glyco_hydro_57
AAA_3
ATPase_2
AAA_25
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
143022408
NCBI-ProteinID:
XP_076036692
LinkDB
All DBs
Position
44:29505811..29520880
Genome browser
AA seq
336 aa
AA seq
DB search
MGVEESDKDKNLPWVEKYRPKELDDLISHEDIISTIHRFIDEDHLPHLLFYGPPGTGKTS
TILACARKLYTPKQFNTMVLELNASDDRGIGVVRQQILNFASTRTIFKAGFKLVILDEAD
AMTNDAQNALRRIIEKFTENVRFCLICNYLSKIIPAIQSRCTRFRFGPLTQEQIFPRLQH
VIEQENVKATEDGKKALLALSGGDMRKVLNILQSTHMAFEKVDEDNVYLCVGHPLKSDIM
NIVNWMLNEQIETAYRNINELKTVKGLALQDILTEVHLYVHRIDFPVMVRVYIVEQLAAI
EKRLSIGSSEKLQLSSLIATFFRARTMVADAEKAQA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgaagagtctgacaaggataaaaatttaccatgggttgaaaagtacagacca
aaggagctggatgatttgatttcacatgaagatataatatcaacaattcatcgatttata
gatgaggatcatttgccacacttgctattttacggacctccagggacagggaagacctct
acaattcttgcttgtgcgaggaaactttatacaccaaagcaattcaataccatggtttta
gaacttaatgcatctgatgatagaggaattggtgttgtgcggcagcagattctaaacttt
gccagcacaaggactattttcaaagctggatttaaattagtaatattagatgaagcagat
gctatgacaaatgatgcccagaatgccttaaggagaataattgagaagtttacggaaaat
gttaggttttgcttgatctgcaattatttgagcaaaatcatcccagctatacagtctcgt
tgcacacgttttcgatttggacctttgactcaggagcagatttttccgcgacttcaacat
gttattgaacaagaaaatgttaaagctaccgaggatggtaaaaaagcattgctggccttg
tctggaggggatatgcgtaaagtcctcaacattcttcaatcaacacatatggcctttgaa
aaggtggatgaagacaatgtatatctgtgtgtaggccacccgctgaagtctgacatcatg
aatattgtcaactggatgctaaatgaacaaattgagactgcatataggaacatcaatgaa
cttaaaactgttaaaggacttgctttgcaagatattcttacagaagttcacctttatgtt
cacagaattgattttcctgtaatggtgagagtgtacattgtagaacagctcgcagcgata
gagaaaaggctttctataggatcttcagaaaaactgcaattgtcttctttgattgccacc
ttctttcgtgcaaggacaatggttgctgatgcagagaaagctcaggcgtga
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