KEGG   Oratosquilla oratoria (Japanese mantis shrimp): 143024650
Entry
143024650         CDS       T11268                                 
Symbol
tex
Name
(RefSeq) THO complex 3 homolog tex
  KO
K12880  THO complex subunit 3
Organism
oot  Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03013  Nucleocytoplasmic transport
oot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143024650 (tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    143024650 (tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oot03019]
    143024650 (tex)
   03041 Spliceosome [BR:oot03041]
    143024650 (tex)
Messenger RNA biogenesis [BR:oot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     143024650 (tex)
Spliceosome [BR:oot03041]
 Complex C
  Other components
   EJC/TREX
    143024650 (tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    143024650 (tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 EIF3I WDR55 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd eIF2A Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N WDR90_beta-prop_4th DSE1_N Beta-prop_HPS5 NBCH_WD40 PAC11 Beta-prop_TEP1_C CFAP251_N Tricorn_2nd PD40 TRM82_WD Beta-prop_WDR75_1st PROPPIN Beta-prop_EIPR1 Beta-prop_WDR11_1st Beta-prop_SCAP B-prop_COPA_B_2nd Beta-prop_Nup120_160 Peptidase_S9_N DPPIV_N Fascin DUF5121
Other DBs
NCBI-GeneID: 143024650
NCBI-ProteinID: XP_076039705
LinkDB
Position
4:21413525..21440327
AA seq 325 aa
MGSYLEDMRSYFQSHNKQKEYVGHNSKVHTIGWNADGRRLASGSYDKCVTIFLFDGHRET
LRKDYTYKGHGDSVDQLCWHPIHCEQLTSASGDKTVRIWDCRTHKCAATINTKGENINIT
WSPDGQTIAVGNKDDLVSFIDARMHKMRHEQQFKFEVNELTWNNTNDLFYLTNTQSGQGY
VHIYNYPEMDLVYTIHAHPGNCICIKIEPHGRYFATGSADALVSIWDSEELYCMRTLTRL
EWPVRTISFSHDGQLLASGSEDLAIDIAHVGTGERVAQINVAYPTFTVAWHPRQHLLAFA
CDDKDDRDRDRDAGTVKLWGLGDRN
NT seq 978 nt   +upstreamnt  +downstreamnt
atggggtcgtatttagaagatatgaggtcttactttcagtcacataacaagcaaaaagaa
tatgttgggcacaattcaaaggtccatacaattggatggaacgccgatggtagacgattg
gcgtcaggttcatacgacaaatgtgtaacgatatttctcttcgatggccacagggaaact
ttgcgaaaggattacacatacaaaggtcatggagacagcgtggatcagttgtgctggcat
cccattcactgtgaacagctcacctcagcaagtggagataaaactgttcgtatatgggat
tgcagaacgcacaaatgtgctgccacaataaataccaaaggggaaaacatcaatataact
tggtcaccagatggtcaaacaatagcagttggaaacaaggatgatcttgtttcatttatt
gatgcacggatgcataaaatgcggcatgagcagcagttcaagtttgaagtaaacgaattg
acttggaacaatacaaatgacttgttttacttaaccaatactcagagtggccaaggatat
gtacacatttacaattaccctgaaatggatcttgtatacacaattcatgctcatccaggc
aactgtatttgtataaaaattgaacctcatggccggtattttgccacggggtcagctgac
gcccttgtgtcaatttgggactcagaagagttgtactgtatgcgcacacttactagatta
gaatggcctgtaaggactatcagcttctcacatgatgggcagttgttagcctcagggagt
gaagacttagccattgacattgctcatgttggaactggagagcgtgtggcacagatcaat
gtggcatatcccactttcacagttgcatggcacccaagacagcacttgcttgcatttgcc
tgtgatgataaagatgaccgggacagagatcgtgatgctggcactgttaagttgtggggc
cttggcgacaggaattaa

DBGET integrated database retrieval system