Oratosquilla oratoria (Japanese mantis shrimp): 143025336
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Entry
143025336 CDS
T11268
Symbol
Dhx15
Name
(RefSeq) DEAH-box helicase 15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143025336 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oot03041
]
143025336 (Dhx15)
03009 Ribosome biogenesis [BR:
oot03009
]
143025336 (Dhx15)
Enzymes [BR:
oot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143025336 (Dhx15)
Spliceosome [BR:
oot03041
]
Complex A
U2 snRNP components
U2 related factors
143025336 (Dhx15)
Complex B
143025336 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
143025336 (Dhx15)
Ribosome biogenesis [BR:
oot03009
]
Eukaryotic type
90S particles
Helicases
143025336 (Dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
Flavi_DEAD
AAA_22
SRP54
AAA_19
ResIII
nSTAND_NTPase5
nSTAND3
AAA_25
Cas3-like_C_2
AAA_30
ATPase
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
143025336
NCBI-ProteinID:
XP_076040947
LinkDB
All DBs
Position
5:4116958..4146869
Genome browser
AA seq
777 aa
AA seq
DB search
MSKRKIDIDPASLKKRFTKTSRPDGRHHDDREDRDGYKDRDRDFDNRSNMSGGNSNMNQG
HMPIMAKNNMGMGKTHAGLGYNMGMAKAAVPGKVAVSLNPFTNLPYTPRYYELYRKRIGL
PVWEYRAKFFELLGRHQSIVLVGETGSGKTTQMPQWCVDFARQRGKKSVACTQPRRVAAM
SVAQRVSEEMDVALGQEVGYSIRFEDCSSSKTILKYMTDGMLLREAMSDPMLENYQVILL
DEAHERTLATDILMGVLKEVLKQRNDLKLVVMSATLDAGKFQNYFDCAPLLNVPGRTHPV
EIFYTPEPERDYLEAAIRTVIQIHICEEVGGDILLFLTGQEEIEEACKRIKREIDALGPD
VGELKCIPLYSTLPPNLQQRIFEPPPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDP
GFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKSEMQDNTY
PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTELG
AIMAEFPLDPQLAKMVIASCEFNCSNEILSVTAMLSVPQCFVRPNEAKKAADEAKMRFAH
IDGDHLTLLNVYHAFKQNMEDVQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLRRTSTD
FNSREYYMNIRKALVSGFFMQVAHLERTGHYMTIKDNQVVQLHPSTCLDHKPEWVLYNEF
VLTTKNYIRTVTDIKPEWLIRVAPNYYDMQNFPQCEARRQLENIIARVESRQFREGF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaaaaattgatattgatccggcatcactaaagaaaagatttacaaaaact
tcaagaccagatgggaggcatcatgatgatcgagaagacagagatggttataaagacaga
gacagagactttgataacagaagcaatatgtcgggtggtaatagcaatatgaatcaaggc
catatgcccattatggctaagaataatatgggcatggggaaaacacatgcggggctgggt
tataacatgggtatggcaaaggcagctgtacctggaaaagttgcagtgtccctgaatcct
ttcaccaacctgccgtacacacctcgatattacgagctctatagaaaacggattggcctt
cctgtctgggaatatcgtgcaaagttctttgagttgctgggcagacatcagagtattgtg
cttgttggagaaacggggtcaggaaaaaccacacagatgccccagtggtgtgtagatttt
gccagacagcggggcaagaaatcagtagcttgtactcagccaaggagagtagcagcaatg
tctgtagcacagagagtgtcagaggaaatggatgtagctcttggacaggaagtgggatac
tctatacgttttgaagactgttcctcatccaaaactattcttaagtacatgactgatggt
atgttgttacgggaagctatgagtgacccaatgttggaaaattaccaggttatattactt
gacgaggcccacgagcggacacttgccacagacattcttatgggtgtgttgaaagaggtc
ttgaaacagcgcaatgacttgaagctggtggttatgtctgccaccttggatgctggcaag
ttccaaaactactttgattgtgctccacttttgaatgtgcctggaagaacccatcctgtt
gaaatattttatacaccagaaccagagagagattacttggaggctgctattagaacagtt
attcagattcatatatgtgaagaggtaggaggtgatatactattatttttgactggccaa
gaagaaattgaagaagcttgtaaaaggataaagcgtgaaattgatgcactaggccctgat
gtgggtgaactgaaatgtattcccctgtactccactctacctccaaatcttcagcagaga
atctttgaaccgccacctcccaacaaaccaaatggggccattgggcgcaaagtggttgtt
tcaacaaatattgctgaaacctcgcttaccattgatggtgtcgtgtttgtgattgaccca
ggatttgcaaaacagaaggtttacaacccacgtatccgtgtagaatcgttactagtgtct
ccaatcagtaaagcatcagcacaacagcgatcgggtcgagctggacgaacgaggcctggc
aagtgcttcagattgtacacagagaaagctttcaaatctgaaatgcaggacaacacatac
ccagagattttaagatctaacttggggtcagttgtgctacagctgaagaagctcggcatt
gatgatcttgtacactttgattttatggaccctccagctccagaaacactcatgagggca
ctagaactgctgaactaccttgctgctcttgatgatgatggtaacttgacggaactagga
gccatcatggcagaattccctcttgacccacagttagcgaaaatggttattgcgtcatgt
gaattcaattgctccaatgagatcctctcggttactgcaatgctctcagtgccccagtgc
tttgtgaggcccaacgaagccaagaaagctgccgacgaagccaagatgcggtttgctcac
atagatggggaccacctcaccctcctgaacgtgtaccatgcctttaaacaaaatatggaa
gatgtccagtggtgttacgacaactttgtcaactaccggtcactcaagtcagcagacaac
gtaagacaacagctgtctcgaattatggatcgatttaacctcagacgcacttccacagac
ttcaactccagagaatattacatgaatattcgaaaagctttggtttcgggattcttcatg
caggttgcacacttggaacgtactggacactacatgactatcaaggataaccaggtggtg
caacttcatccatccacctgcttagatcacaagcctgaatgggttctctacaatgaattt
gtgctcaccaccaagaactatatccgcacagtcactgacattaagcctgagtggcttatt
cgagtagcccccaactactatgatatgcagaatttcccccagtgtgaagccaggaggcag
ttggaaaacatcattgctcgagtggagtcacgacagtttagagaaggattctag
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