Oratosquilla oratoria (Japanese mantis shrimp): 143025393
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Entry
143025393 CDS
T11268
Symbol
tho2
Name
(RefSeq) THO complex subunit 2-like protein isoform X1
KO
K12879
THO complex subunit 2
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03013
Nucleocytoplasmic transport
oot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143025393 (tho2)
09122 Translation
03013 Nucleocytoplasmic transport
143025393 (tho2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143025393 (tho2)
03041 Spliceosome [BR:
oot03041
]
143025393 (tho2)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
143025393 (tho2)
Spliceosome [BR:
oot03041
]
Complex C
Other components
EJC/TREX
143025393 (tho2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143025393 (tho2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
143025393
NCBI-ProteinID:
XP_076041099
LinkDB
All DBs
Position
5:20643444..20726320
Genome browser
AA seq
1576 aa
AA seq
DB search
MANAYRLFTADTWKNWDKSGKAEFIQTIKQLLGDGTADPGLSYPGETKDITRAFYEIVWA
IVKGHLRRDYGCSVLTEILGMHGDFSSQLVEVLTVVDLEVSTMEKYQKQREHLILVIKAL
NLDKLLKERMEIETLGEAGVVKAKKTFHTKQIKLKTKLFYKQQKFNLLREESEGYAKLIT
ELNQDITSSVTPQSIIQVIRSLIGCFNLDPNRVLDLILESFECRPEQSEFYTGLLHQFPC
ESATISELLGFKLNNYVENQRDAKGIYTILALLIQANILNLNDIYVWLTPEDVSMIQDHQ
RDDSEAKEMARKADVISTKDKEKDKESNMRDKDEEEKDKQRIIEKFISNQKLQLCVTLLE
VGDWDHFLEISLRFPDYYIVSSLPVTRALCKLCHITIEPIYRRSCNLPKRIKGRPEEALI
NPLAIPQAKTLDDVVALVFPMVSALGPFLHQDPGLMYKILRVVKRAFKEVRSMNQNLRVV
KKAFQESPVPRDGEKNSFYYEFLGILDESFLPALSLMEANPCVAEEVWDTIKTFPYQHRY
KLYSRWKNECYNTHPLLLRRKTALMKTCKFFMMRITKETVKPTSRVIAKLTHNNPGPVFQ
YILLQVQLYDNLIIPVVDSLKYLTSLSYDVLSYCLVELVSESKDRIANDSMGIAPWLQSL
SAFCGAAFKKYNMELSGMLQFVANQLKAEKSIDLLILREIVQKMGGTDSMEDLTAEKLDA
MCGGELLRREAGQYFQERNIKRSSLRLKEALIEHDLAIPLILLMAQQRSSVVYNQTESPH
LKLVGKLYDQCQDTMVQFGSYLSQILSVEELHERLPQIGSLLSEYHINADVAFFLARPLF
THLVNSKYDDLRRQEKKLDSEQKKLKYIEACNEIFIPIVNSIRPHYSIKVWEDMDPSFFL
TFWTLTMSDLEVPHHMYAKEIKKLTDQINHTNKLPKEDMPSNKRKKETERLTSLRDKLQE
EEKRQKEHVERIYARLKQEKDHWFMLRTARTPKNDTITAFLQLCLFPRCTFTFLDAMYCA
KFVQMLHNLKTPNFSTLICYDRLFCDITYTVASCTEQEAQRYGRFLLGTLETVMHWHSSR
ENYEKECANYPGFVTKYRVSKQEANDYVDYENYRHVVHKWHYKVTKALVMCLESGDYIQI
RNTILILQAVSPKFPAITNLAGVIEKRIEKVKQEERSNRNDLYVLANSYSGRLKAMKSVL
ILESEFHIVTKKKVEPKPEGNISQVSSPSLGGTSVGDKENSSKDSKAEPSSNGPKSEAAE
TANGDIEIRDEKEEKKAAEARNSKEKDKEGSSRRFEEVDGRSDVEDKVSPKEEKDKGKEK
ERKDEKEKSRKRMKDGKKNKQMCPVLQDEEDWADEEKEAERESSVASNTSSTSTKMEPPS
DSYEPARGSKRRKTEQSSKSRNKDEGASRKEHKHKERSKSREPEENRESKKEKKDRKRVC
IDRAHDEGSEVELKRKKAEERGKSSANGRSEEERKERHRGHKDPTHWAANQGRAIYVPRL
KGNSDEYYDRYEYESRTKEWDHHEHRDHHEEREYGIRELERNREYLEKELERNRYEEGRE
RYEDKKNYSSRHKKKH
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgcgtaccgcttgtttacagcggatacgtggaaaaattgggataaatctgga
aaagcagaattcattcagacaattaaacagctcttgggagacggtacagcagatcctggg
ctatcttatccaggtgaaaccaaggatataactcgagcattttatgaaatagtatgggct
attgtcaagggacacctgaggagggactatggatgttctgtccttacagaaattttgggt
atgcatggggacttctcatcacagttggtggaggtcctgactgttgtggacctggaggta
tcgaccatggagaaatatcagaaacagcgagagcatctcattttagtaataaaagcactc
aacctcgacaagctcctcaaagagcgtatggagattgagactctaggagaagcaggagtt
gtcaaagcaaaaaaaacttttcacactaaacaaatcaaactgaaaacaaaattattctac
aaacaacagaaatttaatctattaagagaagaaagtgaaggttatgccaaattaatcaca
gaattgaatcaggatatcacatcctcagtcaccccacagagtatcattcaggttatcagg
agtcttataggttgttttaatttggatcccaaccgtgtccttgacttgatattggagtcc
tttgaatgccgtccagaacagagtgagttttatactggactcctgcaccagtttccatgt
gagtcggcgacaatcagcgagctgctcggcttcaagctcaataattatgtggagaatcag
agagatgcaaagggcatctacaccatccttgctcttctcatacaggccaacatcttaaac
ctcaatgatatatatgtttggttaaccccagaagatgtctccatgattcaagaccatcag
agggatgatagcgaagccaaggaaatggcacgaaaagccgatgtgatatcgaccaaagac
aaagaaaaagataaagaatcaaatatgagagacaaagatgaagaggagaaagataaacaa
agaataattgagaagtttattagtaaccagaagcttcaattatgtgtaactctattagag
gtcggagattgggaccactttttagaaatttccttgcgattcccagactactacatagta
tcctcattacctgtcacaagggcactatgtaaactatgccacattactatagaacccatc
tataggagatcttgtaatttgcccaaaagaattaagggcaggccagaggaagccttgatc
aaccctttagccattccccaggccaagactctagatgatgttgtggcactagttttcccc
atggtctcagctcttggcccattcttacatcaagacccaggtcttatgtacaaaatcctt
cgtgttgtcaagagggctttcaaggaggtacgtagcatgaaccaaaacctgcgtgttgtg
aagaaggctttccaggagagtccagttcccagagatggggagaagaattccttttattac
gagtttttaggcatccttgatgagtccttcttgccggcgctgtctctcatggaagctaat
ccctgtgtggcagaggaagtatgggacaccatcaaaactttcccgtatcaacacagatat
aagctgtatagtcggtggaaaaatgaatgctacaatacacatccattactacttcgacgg
aagacagccctcatgaagacttgcaagttcttcatgatgagaatcactaaggaaacagtc
aaacccacaagtcgggttattgctaaacttacccacaataaccctggaccagtctttcag
tatattttgttacaagttcagctgtatgacaacctgattattccggttgtggacagtctg
aaatacctcacctccctctcgtatgatgtccttagttactgtctggttgaactcgtttct
gagagcaaggacagaatagctaatgattcaatgggtatagccccgtggctgcagtctcta
tctgccttctgtggtgccgcctttaagaagtacaacatggaattatcaggaatgctgcag
tttgttgctaatcagctcaaagcagagaaatctattgatctgctcattctcagggagatt
gtacagaaaatgggtggaacagattcaatggaggacttaactgctgaaaagcttgatgca
atgtgcggtggcgagttgctgcggcgggaagcagggcagtacttccaggagcggaatatc
aagcgttcatctctgcgcttgaaagaggcgttgattgagcatgatcttgcaatccctcta
atacttctcatggcacagcagcgttcctctgtggtttataaccagacagagtcaccgcat
cttaaactcgttggaaagttgtacgatcagtgtcaggacacaatggtgcagtttgggtca
tatctatcacaaatcctaagtgtagaggaacttcatgaacgtttaccccaaattgggtcg
ttgttgtccgagtaccacatcaatgcagatgtagctttcttcttagcccggccactattt
acccacctagttaattctaaatacgatgaccttagaagacaggaaaagaagctagacagt
gaacagaagaagttgaagtatattgaagcatgtaatgaaatctttatacctatagtaaat
agcatccgacctcattacagcattaaggtttgggaagacatggatccatcctttttcctc
acattctggacccttaccatgtctgacctggaggttccccaccacatgtatgccaaggag
attaagaaactcacagaccaaatcaaccacaccaacaaactcccaaaggaggatatgcca
tccaacaaacgcaaaaaggagaccgaaaggctgacatcacttcgggacaaattgcaggaa
gaagaaaagagacagaaagaacatgtagaacgtatttatgctaggcttaaacaggaaaaa
gaccactggttcatgttgcggactgctaggactccaaagaatgacaccatcacggccttc
ctgcagctctgcttatttcctaggtgcacgtttacttttctggatgccatgtactgtgcc
aagtttgttcaaatgctgcacaatttgaagacacctaacttctctacactgatatgctat
gataggctgttttgtgacatcacatacactgtggcatcctgcacggagcaggaggctcag
cgatatggaaggttcctccttggcaccttggaaactgttatgcattggcattccagtagg
gagaactatgaaaaggagtgtgcgaattacccaggttttgtaacaaaatatcgggtttct
aagcaggaggccaatgattacgtggactatgaaaattatagacacgttgttcacaagtgg
cactacaaagtcactaaggctttagttatgtgtcttgaaagtggagactacatccagatc
agaaataccatccttattctacaggcagtatccccaaaattcccagccataactaatttg
gctggtgttattgaaaaaagaatagaaaaggtgaaacaggaagagcgaagcaatcgcaat
gacctgtatgtgctggccaacagttattcgggtcgattgaaggcaatgaagtcggttctc
attcttgaaagtgagttccatatagttaccaagaagaaagttgaacccaaacctgagggc
aacatcagtcaagtttcatccccgtccttaggaggaacctcggtgggggataaggagaac
tctagtaaagactcaaaggcagaaccaagttcaaatgggcccaagagtgaggcagcagag
acagccaatggagatattgagattcgggatgaaaaggaagaaaagaaagctgcagaggca
agaaattccaaggagaaggacaaagagggaagcagtcgtaggtttgaagaagtggatgga
aggtctgatgtggaagacaaagtatcacccaaggaggagaaggacaagggaaaagaaaag
gagagaaaagatgaaaaggaaaaatcaaggaaaaggatgaaggatggaaaaaagaacaaa
cagatgtgtcctgtcttgcaggacgaagaggactgggcagacgaggagaaggaagcagag
cgcgagagcagtgtggcatcgaacacttcgtcaacttcaaccaagatggaaccaccgtca
gattcttatgaacctgcaagaggttcaaaacgtcgcaagactgagcaaagctccaagagt
cgtaacaaggatgaaggagcttctcggaaggaacacaaacacaaggagcgttccaaatca
agggaaccagaagaaaacagagaatctaagaaggagaaaaaagaccgcaagagggtttgt
atagatcgtgcccatgatgagggatcagaggtggaattgaagcggaagaaggcagaagag
cgaggaaagtcttcagcaaatggacggtcagaggaagagcggaaagagcgccacagggga
cataaggacccaacacactgggctgccaatcagggacgagctatatatgtgcccaggctg
aagggaaatagcgatgagtactatgatcgttatgaatacgagtcccgcactaaagagtgg
gaccaccatgaacatcgggaccaccacgaggagagagaatatggtattcgtgagctagaa
agaaatcgtgaatacctagaaaaagaattagagaggaaccgttatgaggaaggaagagaa
cgctatgaggataagaagaactactcgagtagacacaagaagaagcactag
DBGET
integrated database retrieval system
