KEGG   Oratosquilla oratoria (Japanese mantis shrimp): 143025543
Entry
143025543         CDS       T11268                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
oot  Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    143025543
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oot04121]
    143025543
Enzymes [BR:oot01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     143025543
Ubiquitin system [BR:oot04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    143025543
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     143025543
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 zf-C3HC4 Beta-prop_HPS5 zf-C3HC4_3 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 zf-RING_2 zf-RING_UBOX WDR90_beta-prop_4th WD40_like Beta-prop_DCAF12 WD40_MABP1-WDR62_1st RING_XB3-XBAT31 NBCH_WD40 Beta-prop_WDR75_1st zf-RING_5 zf-RING_10 Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_RFWD3 zf-C3HC4_4 zf-rbx1 SR_plectin_7 Prok-RING_4 Spc7 Rtf2 zf-RING_6
Other DBs
NCBI-GeneID: 143025543
NCBI-ProteinID: XP_076041505
LinkDB
Position
5:74504810..74545862
AA seq 648 aa
MASGESRPEGSSTRGPGRGVKRSQPLVLNGLEGTFENKNTDYLCSVCFDLISEAHMTKCG
HTFCYECIKQSIEINKKCPKCNHNIESTDHIFPNLTVNQLIKKKKSESKLYNAFTRRHKG
AALSELRNYLTSESSNLGLSDINNIILILQERREQLEALSTRIRYELMKDFLTQLKKQKE
EQLEKLNGDIKLIKNDLSMVQNILEQVYSTETPSTSRVPQTSMALLTDMLDGECSSDGSS
GIVTKAEVNTEEGFNVPSFSKAAPEPSSRAKRKRMNLHFDDLKECYFSIRNSGLSESGIE
NPDSCLDKFGHCMSKFTQFSSLRPLATISTVHYASEAHNGHSNIASSIEFDKDSEYFAVA
GLTKRIRIFDYSTVVRDTVDLHYPCSDMQSTSKISCVSWSNYYKNMLASSDYDGTVTVWD
AMTKEKLNVFQEHEKRCWSVDFNKVDTRVLASGSDDARVKVWSIDSEHSVASIEAKAHVC
CVQFSPTNRYHLAFGSADHCVHYYDLRNMREPLWVFRGHRKAVSYVKFISSDEIVSASTD
SLLKIWSVNKTHCVRSLQGHTNEKNFVGLATDGEYVACGSENNALYVYYKGLSKKLFSFK
FDQRKSTLEQDSKDEDSSDFVSAVCWRKGSNIIAAGNSLGVIKILEMV
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggcatcaggagagtctaggccggaggggtccagcactcgggggcctgggcgtggggtc
aaacggtcacagccacttgtgctaaatggactagagggaacatttgaaaacaaaaacaca
gactacctctgctcagtgtgctttgatctaatatcagaagcccacatgacaaagtgtggg
cacacattttgttatgagtgtattaagcaaagcattgagataaacaaaaagtgtccaaag
tgcaaccataatattgaaagtacagatcatatattccctaatttgactgtcaatcaattg
ataaagaagaaaaagagtgaaagtaaactttataatgcatttacaaggaggcacaaggga
gctgcacttagtgaacttagaaattatcttacatcagagtcatcaaacttaggactgagt
gacattaacaacatcatcttgattcttcaggaaagaagagaacagttagaggctttgtca
actcggatcaggtatgaactgatgaaagactttcttacacagttgaagaaacagaaagag
gaacaactggagaaattgaatggggacattaagttaattaagaatgatctctccatggtt
cagaatatcttggaacaagtgtattcaacagaaacaccttcaacaagtagagttccacag
acaagtatggctctactaacagatatgctggatggagagtgttctagtgatggaagtagt
ggcatagtaactaaagcagaagtgaacacagaagaaggtttcaatgtaccatctttcagt
aaagctgcacctgaaccatcttctcgtgctaagagaaagagaatgaatcttcattttgat
gatctgaaggagtgttactttagcattcgcaactctgggctcagtgaatcaggaatagaa
aatcctgattcatgcttggataaatttggccattgtatgtcaaaatttactcaattctct
tcactaagacctttagccacaatttctacagttcattatgctagtgaggcacacaatgga
catagcaacattgcttccagcattgaatttgataaagacagtgaatatttcgctgtagca
ggcctaacgaagcgcatcagaatttttgattacagcactgttgttcgagacaccgtggat
cttcactacccttgttctgatatgcagagtacatccaagattagttgtgttagttggagt
aattattataaaaatatgttagccagcagtgattatgatgggacagtcacagtatgggat
gccatgactaaggagaagttgaatgtcttccaagagcatgagaagcgatgttggagtgtg
gattttaacaaggtggatacccgagttttggcttcaggaagtgatgatgcaagggtcaag
gtgtggtctattgatagtgaacactcagtagcttccattgaagccaaagcccatgtttgc
tgtgttcagtttagtccaacaaatagatatcacttggcttttgggtcagctgaccattgt
gttcactactatgaccttcgtaacatgagagaaccattgtgggtattcaggggacatagg
aaagctgtgtcttatgtaaagttcatatccagtgatgagatcgtttctgcttccactgat
agtttgctcaaaatctggagtgtgaacaaaactcattgtgtacggtcccttcagggacat
accaatgagaaaaactttgttggcctggcaacagatggggaatatgttgcttgtggttca
gaaaacaatgctttgtatgtctattacaaaggtctttcaaagaaattatttagttttaag
tttgatcagaggaaatctacacttgaacaagatagtaaagatgaagattcttctgatttt
gtatctgcagtttgttggagaaaaggttcaaacatcatagcagctggaaatagcctcggg
gttattaagatactggagatggtataa

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