Oratosquilla oratoria (Japanese mantis shrimp): 143026282
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Entry
143026282 CDS
T11268
Symbol
Pabp2
Name
(RefSeq) poly(A) binding protein nuclear 1 isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143026282 (Pabp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143026282 (Pabp2)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
143026282 (Pabp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CEP152_CC1
DUF16
WDR18_C
RRM_11
T4SS_LegC2C7
DUF5320
RBD_DEAH11
DUF7310
Motif
Other DBs
NCBI-GeneID:
143026282
NCBI-ProteinID:
XP_076042510
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Position
6:complement(10446995..10475801)
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AA seq
213 aa
AA seq
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MEDELHYEEVVEGGDESYVGDEDQQLNETDQSLETELEAIKARVKEMEEEAEKIRQIQSE
VDKQMMGSPPAAGATSPLNMSIEEKMEVDARSIYVGNVDYGATAEELEQHFHGCGAVNRV
TILCNKFDGHPKGFAYIEFSEKDSVPMAMALDESLFRGRQLKVMPKRTNKPGISTTNRPP
RGIRYRSRRGFPGVGYRPTRRPSRGRRFYYNPY
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagttacattatgaggaggtcgtagaaggtggagatgaaagctacgtgggt
gatgaagatcagcaactaaatgaaacagatcaatccttagagacagagttagaagctatt
aaagcacgagtgaaagaaatggaagaggaggctgaaaaaattcgtcagatccaatcagag
gttgacaagcagatgatgggttctcctcctgcagcaggtgctacctctcccctgaacatg
tctattgaagaaaaaatggaggttgatgcacgctctatttatgtaggcaatgtggattat
ggggcaacagcagaagagctagaacaacatttccatggttgtggtgctgtcaatcgcgtc
acaatactgtgcaacaagtttgatggtcatccgaaaggatttgcatacattgagttttct
gagaaagattctgtaccgatggccatggctctagatgaatccctgttcagaggaaggcaa
ttgaaggttatgcccaagcgaacaaacaagcctgggatttctacaactaatcggcctcca
agaggcatcagatatcgaagcagacgagggtttccgggtgtaggctacagaccaacacga
cgaccttccagggggcggaggttctactacaacccgtactag
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