Oratosquilla oratoria (Japanese mantis shrimp): 143026315
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Entry
143026315 CDS
T11268
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3b subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143026315 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oot03021
]
143026315 (Sf3b3)
03041 Spliceosome [BR:
oot03041
]
143026315 (Sf3b3)
03036 Chromosome and associated proteins [BR:
oot03036
]
143026315 (Sf3b3)
Transcription machinery [BR:
oot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
143026315 (Sf3b3)
Spliceosome [BR:
oot03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
143026315 (Sf3b3)
Complex B
143026315 (Sf3b3)
Complex C
U2 SnRNP specific factors
143026315 (Sf3b3)
Chromosome and associated proteins [BR:
oot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
143026315 (Sf3b3)
TFTC complex
143026315 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143026315
NCBI-ProteinID:
XP_076042604
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Position
6:complement(15248835..15266762)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRASGITHAVHGNFSGARTQELVVSRGRSLELLRPDPNTGKVHTILTTDIFG
VIRSLMSFRLTGGNKDYIVVGSDSGRITILEYNGAKNQFDRVHMETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAQARLTISSPLEAHKSNTLVYHMVGVDVGFENP
LFACLEIDYEEADSDPTGEAVHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLISVPG
GNDGPSGVLVCSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICSATHKTRSMFF
FLTQTEQGDIFKITLETDEDVVTEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFYAPRQLLNLVLVDELDSLSPIMACQIADLANEDT
PQLYTACGRGPRSSLRVLRHGLEVSEMAVSELPGNPTAVWTVKKRADDAFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLACSQLGEDALVQVYPDGIRHIRADRRVNEWKAPG
KKTIVRCAVNHRQVVIALTGGEIVYFEMDPSGQLNEYTERKEMKSDVICMAVGRVPAGEQ
RSRFLAVGLTDNTVRIISLDPNDCLTVLGMQALPALPESLSIIEMGGQEGAENEPRSMGA
LYLNIGLQNGVLLRTVLDSVTGDMSDTRTRYLGSRPVKLFRISIQGSEAVFAMSSRSWLS
YYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSHPLE
YTPRKFVIHQESGHLIIIETDHNAYTEETKRQRKLQMAEELREAAGEDEAEVAERMAEAL
LSEDLPDAVFGAPKAGPGMWASLIRIIEPIKGTTHHTIPLDQNEAAFSICLVKFANQSDP
DQQFLLVGTGKDYQLSPRHVDKGYIYTYRVHSDCVTLELVHRTEVEDVPTSMCMYNGRVL
VAVGKLLRIYDLGKKKLLRKCENKHMPNLIVDLKARGHRVYASDVQESICFVRYKRQENQ
LIIFADDTNQRWVTTSCLLDYDTVAVADKFGNIAIIRLGHDINDDVDEDPTGNKALWDRG
LLNGASQKADIIANFHIGETVNTLEKATLIPGGSESLVYTTLSGTVGVLVPFTSREDHEL
FQNLEMHMRSEHPPLCGRDHLSFRSYFFPVKNVTDGDLCEQFNMIDASKQRSIAEDLDKT
PNELSKRLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatacaatcttacccttcaacgtgcatcaggcattacacatgccgtgcatggc
aatttctcaggggcacgtactcaagaactggttgtttcaaggggccggtccttggaactt
ctacggcctgacccaaacactggaaaagtacatacaattctaacaacagacatatttggt
gtgattcgatctctcatgtccttcagattgactggtggcaataaagattacattgttgtg
ggttctgattctggacgcattaccattctcgagtacaatggtgccaaaaaccagtttgat
cgtgtccacatggaaacttttgggaaaagtgggtgtcgacgcattgtaccaggacagtat
ttggccattgatccaaaaggacgagcagttatgattggtgcaattgagaagcagaagctg
gtgtacattttaaatagggatgcacaagcgcgtcttactatatcctcccccttggaagca
cacaaaagtaataccttggtgtatcatatggttggtgtggatgttggctttgaaaatcca
ttatttgcttgcctggaaattgattatgaggaggctgactctgacccaactggagaggct
gtccatcgcacacaacaaacactcactttttatgaattggaccttggtttgaaccatgtt
gtgaggaagtaccatgaacccttggaagaacatgcaaatttccttatatctgtcccaggt
ggtaatgatggaccctcgggtgttcttgtttgttctgaaaactacataacatacaagaat
ttgggcgatcagccagacatccgatgccctatcccaagaagaaggaatgacttggatgat
cctgaaagaggaatgatttttatctgttcggcaacacacaagaccaggtcaatgtttttc
ttcctcacacagacagagcaaggagacatatttaagataacacttgaaactgatgaagat
gtagttacggaaatcaagctgaagtattttgacactgttccaccagcaactgcaatgtgt
gttcttaaaactgggtttctgtttgtagcttcagaatttggcaaccattatctgtatcag
attgctcaccttggagatgatgatgatgaacccgaattcagttctgctatgccactagag
gaaggcgacactttcttttatgctccaaggcagcttcttaatctggtcttggtagatgag
ttagattcattgtcacccattatggcttgccagattgctgatttggccaatgaggacacc
cctcagctgtacacagcatgtgggcggggaccccgctcttctcttcgtgtgttgcggcac
ggtttagaggttagtgagatggcagtgtcagaactgcccggcaaccctacagcagtatgg
actgtcaagaagagagctgatgatgcttttgatgcttatatcatcgtgtctttcgttaat
gctaccttggtacttagtatcggagagactgtagaggaagtgactgattcaggttttctg
ggaactacgccaactcttgcttgttcacaattaggagaggatgctcttgttcaagtttac
ccagatggcattaggcacattcgagctgatagacgtgtaaatgaatggaaagcaccaggg
aaaaagacaattgtccgttgtgctgtaaatcacagacaagttgtcattgcattgactggg
ggagagattgtttactttgaaatggacccgtctggccaactgaatgaatacacagagagg
aaggaaatgaagagtgatgtgatatgtatggctgtgggcagagtgcccgcaggagaacaa
agatctcggtttttggccgtggggcttactgacaacacagttagaattatatctttggat
ccaaacgattgtttgactgtgctgggtatgcaggccctaccagccctcccagaatcttta
agtataatagagatgggcggtcaggaaggggcagaaaatgaaccgaggagtatgggggct
ttgtaccttaatattggtcttcagaatggtgtactcctgagaacagtgttagattctgtg
acaggtgacatgtcagacacacgaacccgataccttggctctcgaccagtcaaactcttc
cgcattagcattcagggtagtgaagctgtatttgctatgtcgtcacgttcatggctgtcc
tattattatcaaaaccgctttcatttaactccattgtcatatgagagtttagagtatgct
gcaggtttctcttctgagcagtgtccagagggtattgttgcaatctctacaaacacactc
agaattttggctcttgaaaaattgggagcagttttcaaccaggtatctcatcccctggag
tacacaccacgcaaatttgtcatccaccaagagagcggacatcttatcattattgaaact
gaccataatgcctatacagaagaaaccaagaggcagagaaaacttcaaatggctgaagaa
ttaagagaagcagctggtgaggatgaagctgaagttgcagagcggatggctgaagctctc
ctatcagaagacctgcctgatgctgtatttggagcaccaaaggctggaccaggaatgtgg
gcatctctcatccgtatcattgaacctattaagggaaccacacaccatactattccacta
gatcaaaatgaagctgctttcagcatatgtttggtcaaatttgccaaccagagcgatcca
gaccagcagtttcttttggtcggcactggcaaggattatcaactaagcccaagacatgtc
gacaagggctatatctatacctacagagtccacagtgattgtgtcactcttgaacttgtg
cacagaactgaagtagaggatgttccaacttcaatgtgtatgtacaatggaagggttttg
gtggcagttggcaaactactaagaatatatgatttaggcaagaagaagctgctgagaaag
tgcgagaataaacatatgccaaatctcatagttgatctcaaggccagaggacatcgtgta
tatgccagtgatgttcaggaaagtatatgctttgttagatacaaaagacaagagaaccag
ctcatcatatttgcagacgacacaaatcagagatgggtgactacatcatgccttctggat
tatgacacagttgcagttgcagacaagtttgggaacattgctattataaggttgggtcat
gacattaatgatgatgtggatgaagatccaacaggcaacaaggcactttgggacagggga
ctgctcaatggtgcctcacagaaagcggacatcattgccaatttccatattggagaaact
gtgaacacattggagaaagctacattgatccctggtggaagcgagtctttagtttacaca
accctgagtggtactgtaggagtcttggtaccatttacttccagagaagatcatgaactc
ttccaaaacctggaaatgcatatgagatctgaacacccacccttgtgtggaagagatcac
ttatcctttaggtcgtatttcttcccagtcaaaaatgtcacagatggagacttgtgtgaa
cagttcaatatgattgatgctagcaagcagaggagtattgctgaggaccttgacaaaaca
ccaaatgaattgtctaagagacttgaagacattagaacaagatatgctttctaa
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