Oratosquilla oratoria (Japanese mantis shrimp): 143026460
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Entry
143026460 CDS
T11268
Name
(RefSeq) patched domain-containing protein 3-like
KO
K12385
Niemann-Pick C1 protein
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
oot04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
143026460
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
143026460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oot02000
]
143026460
Transporters [BR:
oot02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
143026460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
ACR_tran
MMPL
Motif
Other DBs
NCBI-GeneID:
143026460
NCBI-ProteinID:
XP_076042992
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All DBs
Position
6:complement(43946802..43953841)
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AA seq
998 aa
AA seq
DB search
MKISPPDYKVCMPCRSCLDKGNGTDKGPTSSINSCLTSVSSSVIGFFEYVFYSYGVAIAK
RPIVFILLSLVLCGACCIGLLNFKTESRGYKLWIPEDSDYIKIQEWQTEEFPSDSRVHLG
LYEAENVLKKEVLLNMLDVHEKVANITVEGGKSWEDLCARLPVVGGPFGRRKKRSSSKFG
DEFRERAKRQTDVVFDWSSLVSRDDYCDLQETLRTECIENSLLEVWGYDRDYLESLTPET
IIRDLSQAETSSVTGLPANFTKYLGGITRNAEGKIIGARAATHTWIAEVDRTAIDNGESS
DDPGTESKIDKTSSDWEKRLIVELGETSYRLDSSNFYYSVASSFGLISGETIQGDVQMLG
LGFVIVFIYVVIMLGRFNLVEQRPILSLLGLSSVGLAIGVSYGLCSAFGILYGPVNSVLP
FLLLGLGIDDMFVIMQTWNNLELEEEQVPLVERVGLTLKHAGVAITVTSVTDFTAFAIGS
TTVLPALRSFCLYAAIGIAAIYFFQSTYFVAWLTYDQRRLESKRQGCFWCLKLDNWTPNE
CSKKDLLQNFFENYYARILLKLPTKILVILFTVALLGVTSWGVSNLRQDFDPIWFLPQRS
YLYQFFTKQRSYYPSSGQEGIIYFGQVDLVREMPRIEELVSRLKESNSISEVSDWYSDFK
SYWVDKGVSIPDPNMAKNDFQDRLSQFLFAPVGSKYRRRNFRFLGNLTCKDPAPPVRASS
IGYKHILLVGSKPEIAAMSEVKRIIASMNFSGLVAPWARSYSEWETNEIIEEELYRNMGL
ALLVVFLMTLLLIASLSTSLMVLLCVVLTLVDVCALMNWWGLTIDTVSCIDLVLAIGLCV
DYAVHVGHTFMTESGTRNQRARQTVAKIGPAVLNGGISTFLAFAPLAASDSHVFLTFFKI
FFAVCMFGLYNGLVFLPVLLSFVGPAPYETSVISSKVSSTDTTPQKKSSDWNSAPGMEKM
KTHSAGKNGHSNHNSARDLTIEDVTPGRDQTMNTTVSS
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatcaccacccgactacaaggtatgcatgccatgcagatcctgtctggacaaa
ggcaacgggactgacaaaggaccgacaagttcgatcaactcctgtctcacctccgtcagc
agttcggtcatcggtttcttcgagtacgtcttctactcctacggtgttgccattgccaaa
cgcccaatcgttttcatcctcctgtcgttggtcctgtgcggagcctgttgcatcggactc
ctcaacttcaagacagaatcacgcggatacaaactctggatcccggaagattcggattac
atcaagatccaagaatggcagactgaggaattccccagcgactctcgagttcatcttgga
ctttacgaagcagagaatgtcttgaagaaggaggtgctcctgaacatgctggacgtccat
gaaaaggtagccaacatcacagtggaaggcggcaagtcgtgggaggacctctgtgctcga
cttcctgttgtcggtggtccgttcggtcggaggaagaagagaagttcttccaaattcgga
gacgagtttagagaacgagcgaagcgccagaccgatgttgtgttcgactggagttcattg
gtttcccgcgacgactactgtgacctgcaggagaccttgagaacggagtgcattgaaaac
agtctcctcgaagtctggggctatgatcgagactatctcgagtccctcacacccgagacc
atcatccgtgacctgagccaagctgagacgagttcggtcactgggcttccggccaacttc
accaagtacctcggaggcatcacgcgaaacgcggaggggaagatcatcggggcgagagcg
gcgactcacacatggatcgccgaagtcgaccgaactgccatcgacaacggggagtcttca
gatgatcccgggacggagtcgaaaatagacaaaacttcgtcggattgggagaagcgactt
attgtggagttgggggagacatcatatcgtctagacagtagcaacttctattatagtgtg
gcctctagttttggtttgatctctggagagaccattcaaggcgatgtgcagatgctgggt
cttgggtttgtcatcgtgtttatatacgttgtcatcatgcttggcaggttcaacctagtg
gaacagagacctatcctctccttactcggccttagcagcgtcggattagccatcggagtg
tcgtatggcctttgttcagcctttggtatcttatacggtcccgtgaacagcgtcctccct
ttcctgctcctcggcctcgggatcgatgacatgttcgtcataatgcagacttggaacaac
cttgagctggaggaggagcaagtgccactcgtcgaacgcgtgggtctcaccctcaaacac
gcgggggttgcgatcaccgtcacctcggtgaccgacttcacggccttcgcgatcggatcg
acgaccgtccttcccgctctcaggtccttctgtctttatgcggccattggcatcgccgcg
atctacttcttccagtccacttacttcgtggcctggctcacgtacgatcaacgccgtctc
gagagcaagcgtcagggatgcttctggtgccttaaactcgacaactggactccgaacgag
tgtagtaagaaagacttactacagaactttttcgagaactactacgccaggattctgttg
aaactgccgaccaagatcttggtgatactgttcacggtggccctcttgggagtgacttcg
tggggcgtctcgaacttacggcaagacttcgaccctatctggttcctgccacagagatcc
tacttgtaccagttctttaccaaacagaggtcttattacccgtcctccgggcaggaaggt
atcatctacttcgggcaagtagatctagttcgagaaatgcccaggatcgaagaactggta
tcccgcctgaaggaaagtaattccatcagtgaagtgtctgactggtactcggacttcaag
agttactgggtcgacaaaggcgtcagcattccggatcccaacatggccaagaacgacttc
caagaccgactcagccagttcctcttcgctccagttggatcgaagtacagacgacggaac
tttcgtttcctgggaaacttgacgtgcaaggaccctgcgcccccagttcgagcctccagc
atcgggtacaaacacatcctcctcgtgggttcgaagcccgagatcgccgccatgtctgaa
gtgaaaaggataatcgcgtccatgaacttctctggcctggtggcgccgtgggctcggtct
tacagcgaatgggagacgaacgaaatcatcgaagaggaactctaccggaacatgggcctc
gctctcctagtggtcttcctcatgaccttgctcctcatcgccagcctttccaccagtctc
atggtgctcctctgtgtggtgctcacactagtggacgtgtgcgcgctgatgaattggtgg
gggctgacgattgacaccgtctcctgtattgacttggtacttgctatcggactctgtgtt
gattacgcagtgcacgtaggccacaccttcatgacggagtcaggcacaaggaaccagcgt
gcaagacagacggtggccaagattggcccagcggtgctcaatggtggcatcagcaccttt
ctggcctttgcacctcttgcggcatcagactcgcatgtctttctcaccttcttcaagata
ttctttgctgtttgcatgttcggactttacaacggacttgtgtttctccctgttctgctc
tcctttgttggacccgcgccttacgaaacttccgtcatctcttccaaagttagcagcact
gacactacaccacaaaagaagagcagtgactggaatagtgctcctggtatggagaaaatg
aaaactcactcagcaggaaaaaatgggcacagtaaccacaattctgctcgtgatcttaca
attgaagatgtcactcctggtcgtgaccaaactatgaatacaactgtatcatcataa
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