Oratosquilla oratoria (Japanese mantis shrimp): 143027745
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Entry
143027745 CDS
T11268
Symbol
PolD1
Name
(RefSeq) DNA polymerase delta 1, catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03030
DNA replication
oot03410
Base excision repair
oot03420
Nucleotide excision repair
oot03430
Mismatch repair
oot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143027745 (PolD1)
03410 Base excision repair
143027745 (PolD1)
03420 Nucleotide excision repair
143027745 (PolD1)
03430 Mismatch repair
143027745 (PolD1)
03440 Homologous recombination
143027745 (PolD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oot03032
]
143027745 (PolD1)
03400 DNA repair and recombination proteins [BR:
oot03400
]
143027745 (PolD1)
Enzymes [BR:
oot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
143027745 (PolD1)
DNA replication proteins [BR:
oot03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
143027745 (PolD1)
DNA repair and recombination proteins [BR:
oot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
143027745 (PolD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
143027745 (PolD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DNA_pol_B_2
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
143027745
NCBI-ProteinID:
XP_076045366
LinkDB
All DBs
Position
8:56006645..56369403
Genome browser
AA seq
1099 aa
AA seq
DB search
MDTRQSNSQESGGGGKKFRTDDDEMDDDFNFEDSEEFLLEMEERMEIDSAEKGDVDDEDA
DSKWSRPPLAPLNPDTDNLVFQQIEIDHYIGKAMEGMPGQQLGQVPIMRMFGVTDAGHSV
CCHVHGFSPYLYAACSSTFKQEHLGPFKNALNKAVLEDMRSNKEQIVDAVLDVDLVMRES
IYGFHGNKPSQFLQITMALPRLIAAAKRLLGDGKVVFGTMNVAYEAYESNIDFEIRFMTD
THVVGCCWIELPAGSWKSREEKDFVSRAQIEVDVAWDKFIAHPPEGEWSRVAPFRILSFD
IECAGRKVYNKQGRLINCVFPEPNHDPVIQIGNMVQCQGESEPFIRIIFTLKECAPIVGA
KVKSYEQEKNMLEDWAIFLRQVDPDIITGYNIGNFDFPYLINRAKHLKCDNFFKLGRVKN
IRSNIKEVTLQSKQMGKRENKIVNTEGRCQFDLLMVLVRDYKLRSYTLNAVSYHFLSEQK
EDVHHSIISDLQNGTPLTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLSYL
LTRGQQIKVISQLLRKAKEQGLLLPVHKGQGEEEYEGATVIEPVRGYYDVPIATLDFSSL
YPSIMMAHNLCYTTLLQGGPSIAQKHNLEPDEYIKTPSGNFFVKSSKRRGLLPEILESLL
SARKKAKADLKKETDPLRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFG
RDMIAQTKEQVEKKYTLENGYEHKAEVIYGDTDSVMIKFGVTTVAEAMELGKEAAEYVSD
KFVKPIKLEFEKVYFPYLLINKKRYAGLYFTKADTYDKMDCKGIETVRRDNAPLVAHLIN
TCLQKILIDRNPTGAVDFAKQTISDLLCNRIDISQLVITKELTKTEKEYAAKQAHVELAN
KMRKRDPGNAPKLGDRVPFVIVAASKGTPAYEKAEDPIYVLENSLPIDYEYYLTNQLSKP
LLRIFEPILGDKAESQLLKGDHTRSRIITHSKVGAMAKFITKKASCVGCKVPIPSAGEAL
CQHCKRKEGDIYLSKMEALGELEEKFSRLWTQCQRCQGSLHEEVICTSRDCPIFYMRKKV
QLELVDQNKIIQRFGAPAW
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagacaatctaatagtcaggaatcaggaggaggaggcaagaagttcagaact
gatgatgacgaaatggatgatgattttaattttgaagacagtgaagagtttttgcttgaa
atggaagaaagaatggaaattgactcagcggaaaagggagatgttgatgatgaagatgca
gacagtaaatggagtagaccaccacttgcacctcttaatcccgacacagacaacttggta
tttcaacagattgaaattgaccactacataggaaaagccatggaaggtatgccaggtcaa
cagcttggtcaggtgcccatcatgcgcatgtttggggtgactgatgcagggcactctgtg
tgttgccatgtgcatggattttccccatatttgtatgcagcatgtagcagcaccttcaag
caggaacatctgggacccttcaagaatgccctgaacaaagcagtattggaagatatgagg
tcaaacaaggaacagattgtggatgctgtcttggatgttgatcttgtgatgagggaaagt
atatatggtttccatggcaacaaaccatcccagttcttacagatcaccatggcattacca
cggttgatagccgctgccaaacgtttacttggtgatggcaaagttgtatttggaacaatg
aatgttgcttatgaagcttatgagtccaatattgactttgaaatcaggttcatgactgat
acacacgtagttggctgctgctggattgagcttccagctgggtcctggaagtcacgtgaa
gaaaaagactttgtatctcgggcacaaattgaggtggatgttgcctgggacaaatttatt
gctcacccacctgagggggaatggtctcgtgtggcacccttccgtatcctgtcctttgat
attgagtgtgctggaaggaaagtatacaacaaacaaggaaggctcatcaattgtgttttt
ccggagcccaaccatgacccagtgatccaaattggcaacatggtgcagtgtcaaggagag
agtgaaccctttatccgaataatttttaccttgaaggagtgtgcacccattgttggtgca
aaagtcaaatcatatgaacaggaaaagaatatgctagaagattgggctatctttctgcgg
caggtagaccctgacatcatcaccggctataacattggtaactttgacttcccttacctt
attaacagagccaaacacctgaagtgtgacaatttcttcaagctaggaagagtaaaaaat
ataagatccaacatcaaggaggtgacactacagagtaagcagatgggaaaaagggagaac
aagattgtcaatactgagggcaggtgtcaatttgaccttctcatggtattggtgcgggac
tacaagctacgttcttacacactcaatgctgtgtcctaccatttcttgagtgagcaaaag
gaagatgtgcatcattccataatttcagatttacaaaatggaacacctttgactcgaagg
agattggccgtatactgtcttaaggatgcatacttaccccttcggctgttggacaaacta
atgtgtatcatcaattacatggagatggcacgtgttactggtgtaccattgtcataccta
ctcacccgtggtcagcaaatcaaggtcatctcacagttgttaaggaaggcaaaggaacag
ggtttgcttcttccagtacacaagggacaaggtgaagaggaatacgaaggagccacagtt
attgaacctgttcgaggctactatgatgtaccaattgccactttggatttctcttccttg
tacccatctattatgatggcccataatctgtgttatacaacactcctgcaaggtggccca
agtatagcccagaaacacaacttggaaccggacgagtacatcaaaactccatctggaaac
ttctttgttaaatccagcaaacgtagaggattattaccagaaatcttagaatcattgctt
agtgcaagaaaaaaggcaaaagctgatctgaagaaagaaactgatcctcttagaaagaag
gtacttgatggtcgtcagctagctctgaagatttctgctaactcagtgtatggatttact
ggggctcaagtaggcaagctgccatgccttgaaatctcacagagtgtaacagcttttggg
cgagatatgattgctcagaccaaagaacaggttgagaagaaatacacattggagaatggt
tatgaacacaaagcagaggttatatatggagatactgattctgtaatgatcaagtttgga
gtaaccacagtagctgaggcaatggagcttggcaaagaggctgcagagtatgtgtctgat
aaatttgtgaagcccatcaaacttgagtttgaaaaggtttatttcccctacctgcttatc
aacaagaagcgctatgctgggctatacttcacaaaggcagatacctatgataagatggat
tgcaaaggaattgaaactgtgcgaagagataatgcaccccttgttgctcaccttatcaac
acgtgcctacagaaaatcctcattgacagaaaccctacaggtgcagtggactttgccaaa
cagacaatatcagatttgttgtgcaatcgtattgatatttcccagttggttatcactaaa
gagctgaccaaaacagagaaggaatatgcagccaagcaagctcatgttgagttggctaat
aaaatgaggaagcgagaccctggaaatgcacccaagctgggagatcgtgttcccttcgtc
attgtggcagcatccaaaggaacacctgcatatgaaaaagcagaggacccaatatatgta
ttagaaaacagtcttcccattgattatgaatattacttaactaatcagttgagcaaacct
ttactcaggatatttgaacctattttgggagataaagctgaatctcagttattaaagggt
gaccacacgcgctcccgtatcatcactcatagcaaagtaggtgccatggcaaaatttatc
actaagaaagcttcttgtgtaggctgcaaagtgcccatcccctctgcaggagaagccctc
tgtcagcattgcaagaggaaggaaggagatatatacctgagtaaaatggaagctctaggg
gaactagaggaaaagttttcacggctgtggacacagtgtcagaggtgccaaggctcactg
catgaggaagtaatctgtaccagtcgtgactgtccaattttctacatgcgaaagaaagtg
caattagaactggtagatcagaataagatcattcaacgttttggtgctccagcatggtga
DBGET
integrated database retrieval system
