Oratosquilla oratoria (Japanese mantis shrimp): 143028161
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Entry
143028161 CDS
T11268
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
oot
Oratosquilla oratoria (Japanese mantis shrimp)
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143028161
03041 Spliceosome [BR:
oot03041
]
143028161
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
143028161
Spliceosome [BR:
oot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
143028161
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_MUD2_C
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
143028161
NCBI-ProteinID:
XP_076045986
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All DBs
Position
9:complement(7317578..8640501)
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AA seq
432 aa
AA seq
DB search
MLATMATLMMPAPAPTMAMNPPALPLTPAKHETNNTKNNHNNNNGQKQAFRPSEFSWRHH
LAPRPSSFAEHYHIFVGDLSPEIETHTLREAFAPFGEISDCRVVRDPHTLKSKGYGFVSF
VKKADAETAITNMNGQWIGSRNIRTNWATRKPPAPKNNDANQKPLTFDDVYNQSSPTNCT
VYCGGITNGLSEELMQKTFAPYGQIQEIRVFKDKGYAFVRFSTKESATHAIVSVHNTEIN
GQPVKCSWGKESGDPNNTPVTTQVMTLTDVSECLSLQPLPGSQYPYNYAGQMGYWYPQGY
PAQVQGQQFLGMQGFAYGQYGYQQGMAGMAGVPTWQGVPQPQLPTGQMAQLQQPASMVGA
YPVQQFQLSTPYLLGTTPGTLVSDEGPAPLSQYHTSHTTATPPHYHTATLATPQHCHTTQ
STLPKFHTTLLH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgaccatggccacgcttatgatgcccgcccccgcgccaaccatggccatgaac
cctccagccttaccccttacgcccgcaaagcacgaaaccaataacacaaaaaacaaccac
aacaacaacaacggccagaagcaagctttccgtccatccgaattcagttggagacaccat
ttggccccgaggccttcctcttttgcagagcactatcacatcttcgtgggggatctaagt
ccggagatcgagacgcacacccttagagaggccttcgctcccttcggcgagatctcagac
tgccgtgtggtgcgggatcctcacactctcaagtctaagggatatggttttgtgtccttc
gtcaaaaaagcggacgccgagacagcaattaccaacatgaacggacagtggataggatct
cgtaatatccgcaccaattgggcaactcgcaaacctcccgcgcctaagaacaatgatgcc
aaccagaagcctctgaccttcgacgacgtctacaaccagtcttcgccgaccaactgcact
gtctactgcggcggcatcactaacggcctctcggaggagctcatgcagaagactttcgcc
ccctacggtcaaattcaggagatccgcgtctttaaggacaaaggctacgccttcgtcagg
ttctcgacgaaggagtccgccacccacgccattgtttctgtgcacaacaccgagatcaac
ggccaacctgtaaagtgttcgtggggcaaggagtccggcgatcccaacaacacgcccgta
acgacccaagtcatgacgctgaccgatgtgtccgaatgcttgtctttgcagccgctgccg
ggctcccagtacccatacaactacgcggggcaaatgggttattggtaccctcagggatac
cctgcacaggtgcagggacagcagttcctgggaatgcaaggcttcgcttacggacagtac
gggtaccagcagggcatggcggggatggctggagttcccacgtggcagggcgttccacag
ccgcagctgcccacaggacagatggcgcagcttcagcagccagcttccatggtgggggct
tatcctgtgcaacagttccagctgtcgaccccgtacctacttggtaccaccccgggcacc
ttggtgagtgacgagggcccagctccactctcgcagtaccacactagtcataccacagcc
acaccaccacattaccatacagccacacttgccaccccacaacactgccataccacacaa
tctacacttccaaaattccataccactctactacactag
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