Oratosquilla oratoria (Japanese mantis shrimp): 143028215
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Entry
143028215 CDS
T11268
Symbol
Aptx
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
143028215 (Aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oot03400
]
143028215 (Aptx)
Enzymes [BR:
oot01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
143028215 (Aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
143028215 (Aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
143028215 (Aptx)
DNA repair and recombination proteins [BR:
oot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
143028215 (Aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
143028215 (Aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Apiosidase
K_trans_C
DUF6819
Motif
Other DBs
NCBI-GeneID:
143028215
NCBI-ProteinID:
XP_076046128
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All DBs
Position
9:13214598..13222924
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AA seq
196 aa
AA seq
DB search
MATAAVKSGKTSGQTSSKNGHWSKGLLASMNDPNLIVESDEHIVIIKDKYPKARYHFLIL
PREKIPNLKSLKANQVDLLQYMDERAQLLGARHPQVTFRYGYHAIPSMSQLHLHMISQDF
DSPCLKTKRHWNSFNTRYFLDSEDVIRCLKERGTVISMTPVAGEKLLEQPLRCHKCVYAP
QNMPKLKQHLLKHIDN
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcagcagtgaagtctggaaaaacaagcggccaaacttcatccaaaaatggg
cattggtcaaaaggactgttggcatcaatgaacgatccgaacttgatcgtagaaagtgat
gaacacattgtaataataaaggataaatacccaaaggctcgttatcacttccttatatta
ccaagagaaaaaattccaaaccttaagtcactgaaggcaaatcaggtggatttgttacag
tacatggatgagcgtgctcagctccttggagctcgccatcctcaggtgacattcaggtat
gggtatcatgctattccaagtatgtcacagttgcatcttcatatgataagtcaagatttt
gattctccttgtttgaagacaaaacgccattggaatagctttaataccagatacttcctg
gatagtgaagatgtcatcaggtgccttaaggaaagaggaactgtgatttccatgactcct
gttgctggggaaaagcttttggaacagcccctcaggtgtcacaagtgtgtttatgcacca
caaaatatgcccaaactgaaacaacaccttttgaaacatattgacaactaa
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