Oratosquilla oratoria (Japanese mantis shrimp): 143028247
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Entry
143028247 CDS
T11268
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
143028247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oot03009
]
143028247
Ribosome biogenesis [BR:
oot03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
143028247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Utp13
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_IFT122_1st
WDR54
Beta-prop_SPT8
NHS
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
143028247
NCBI-ProteinID:
XP_076046219
LinkDB
All DBs
Position
1:complement(57746107..57774130)
Genome browser
AA seq
1011 aa
AA seq
DB search
MASKQLLKNNFEVVTKYDAYFTGKNVLVTNDGESLLCECGESVGMVSLGTGQVKGRVTCE
EDWVTSISLSPNNSTLVVALKSTSINQYAWPSTNLVRTFKSYHKGPVMVMTWDASSTLLM
TGGADSSARIWDLGQKYCTHSLKGAQGVFGAVLLDPNLHKRPHAYGAVNNTIHIWQLEAG
SSRIAATLEGHHSAVTAMEIAKNPQYLVSVGLDRVIILWNLEKKNSERIIPVNESLSGLL
LQPKGVTFPGVTEEAEHIYALVVGDKGVLRVWEVDSGKEVYAQSKPLVTPPDQDGVTLIN
QLSYCHALESVVLTSFDHSILCAKTNTLEVWKQLSGYNDQILDLIYVGEKDSHLVVATNS
AQLRIYECATFSCSLVQGHSALVLALARHPTISSFFASSSNDNTVRLWHLQSSGSAVCVA
VASGHTLSVGSIAFGDSFLVSGSKDTCLKTWIIDQSIKDGETNDSMLLTSLATEKAHEKD
INSVCVSVNSKLVASGSQDRIAKVWDAKTLQLQGVLKGHRRGIWCVQFSPIDEVLATASA
DGTIKIWTLTEYTCASTLEGHSVSVLRLCWLTQGLQILSSGSDGLIKLWIVKTRQCVQTF
DEHEGKTWALAVSEDENKIISGAEDSTLVLWKDVTQEEREKVFEKAAAEAKEEQTLANLI
QDKKWTEALGLAIQMNRPMCALTTLKTILNDEPNQLPPVVQNLRDDQLSALLRYMAQWNT
KTKNSREAQTILNILLRNRLPEELEALDGWKEAVEGLLPYTERHYKRTMALHRAGSILQY
MASAITLGADPSKIKIPDLPDTSTLFLSISNSVEAEKEARKVNNTSDSSDDEMVDEELRE
AIKSSIMVVDSDSGEEVGDKEEESESEEELEEKQEEIEVEEEKHMEEQDQEEEEEEWEEE
EEVDEGIEEEGEVVTPVKPGTIEDLNANFKFEKVEVDEDEDEDDYNHEVKEIVDEAPKKK
RKGFSMDRLGMVESGQKKIKGDRKINKNKKNSKKRNMPNGKKPHGKRLKSR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaacaacttttgaaaaataattttgaagtggtcacgaagtatgatgcctac
tttacagggaagaatgtcctcgtcacaaatgatggagaatcactcttatgtgagtgtgga
gagagtgttggaatggtgtcacttggcactggccaggtgaaaggcagagtcacatgcgaa
gaggattgggtgacatctatcagtctttcacccaacaactcaactcttgttgtagccctt
aaatcaacttccatcaatcagtatgcctggccaagcacaaatttggtgcggactttcaag
tcataccacaagggaccagtaatggtgatgacttgggatgcatcctcaacactgcttatg
acaggtggtgcagactccagtgcacgtatatgggacctggggcagaaatattgtactcac
agtttaaagggagcacagggagtatttggtgctgttttattagaccctaacctgcataag
agaccacatgcctatggggcagtaaataacacaattcatatatggcagttagaagctggg
tcttctcgcattgctgcaactctagaaggtcatcattcagcagttacagcaatggaaatt
gcaaagaatccacagtatctagtcagtgttggattggatcgagtaattattttgtggaat
ttggagaagaaaaatagtgaaagaattattcctgtaaatgagtcgctgtcgggtcttctg
ctgcaacccaaaggagtcacctttccaggagtcactgaagaggcagaacacatttatgct
ctggtagtgggagacaaaggtgttcttcgtgtatgggaagtagacagcggtaaagaggta
tatgctcaaagcaaacctttagtaacacctccagatcaggatggtgttactctgatcaac
caactctcttattgtcatgcacttgaatctgtagtacttacctcctttgatcactccata
ctttgtgccaaaacaaacactctagaagtctggaaacagttatcaggctacaatgatcaa
attctggatttgatatatgtaggggagaaagactcgcacttagttgttgctacaaatagt
gcacagttgcgcatctatgaatgtgccacctttagctgcagccttgtccaaggacactcg
gcattagtccttgccttagccaggcatcccaccatttcttctttctttgcctcaagctca
aatgacaacactgtacgcctgtggcacctgcaaagtagtggatcagcagtgtgcgttgct
gttgcatctggacacacactgagtgttggcagcatagcttttggtgattcgttcttggta
tctgggagcaaggatacttgcttgaagacctggatcattgaccagagcatcaaggatggg
gagacaaatgatagcatgttgctcacatcactggcaacagaaaaggctcatgaaaaagac
attaatagtgtttgtgtgtctgtcaacagtaagcttgttgctagtggatcacaagacagg
attgccaaggtatgggatgccaaaacacttcagttgcagggtgtacttaaggggcaccgg
cgaggcatttggtgtgtccagttttctcccatagatgaagtccttgctacagcatctgca
gatgggaccatcaagatctggacattgacagagtatacttgtgcttctacattggaaggc
cattctgtaagtgttcttcgcctgtgctggttgactcaaggtcttcagattttatcatca
gggtctgatggcctgatcaaactttggattgtgaaaacacgacagtgtgtgcaaacgttt
gatgagcacgaaggaaaaacttgggctcttgctgtgtcagaggacgaaaataaaatcatt
agtggtgcagaggattcaaccttagtattatggaaggatgttactcaagaagaacgggaa
aaggtctttgaaaaagctgcagcagaggcaaaagaagaacaaactttggcaaatcttatt
caagacaagaaatggactgaagctctgggtttggccattcaaatgaacagacctatgtgt
gctcttaccactctcaaaaccattttgaatgatgagccaaatcagttgccccctgtagtg
caaaacttgagggatgaccaactatcagccttgttgcgatacatggcacagtggaacacc
aagaccaaaaacagtagagaagcacagacaatcttgaacattctgctacgcaaccgtctt
ccagaggagttggaggcactggatggttggaaggaggcagtggagggacttcttccttat
actgaacgacattataagcggacaatggctctacacagagcaggctcaatacttcaatac
atggcatctgctatcactcttggggctgatcccagtaaaatcaaaattcctgatctccct
gacacatcaactttgttcctctctataagtaatagtgtagaggctgagaaagaagcaagg
aaggtaaacaatacaagtgatagtagtgatgatgaaatggtggatgaagagctcagggaa
gcaatcaagtcctccattatggttgtagattctgatagtggggaggaagtgggagacaag
gaagaggagtcagagagtgaagaagaactagaagagaaacaagaggagatagaagtggaa
gaagagaagcatatggaagaacaggaccaggaagaggaagaagaggagtgggaggaggaa
gaggaggtggatgagggaattgaagaggaaggggaagtagtcactccagttaagccagga
actatagaagacttgaatgccaatttcaaatttgagaaagtagaggttgatgaagatgaa
gatgaagatgattataatcatgaagtgaaagaaattgtggatgaagctccaaagaagaaa
aggaaagggttttctatggatcgccttgggatggtggagagtggacaaaagaaaatcaag
ggagacagaaaaataaataagaataaaaagaattccaaaaaaagaaatatgccaaatgga
aagaaacctcatggaaaaagattaaaaagcagatga
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