Oratosquilla oratoria (Japanese mantis shrimp): 143028262
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Entry
143028262 CDS
T11268
Symbol
HBS1
Name
(RefSeq) translation elongation factor EF-1alpha (GTPase) HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143028262 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143028262 (HBS1)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
143028262 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143028262
NCBI-ProteinID:
XP_076046206
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Position
9:complement(21806147..21882093)
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AA seq
758 aa
AA seq
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MTDKSTRKYSQRYRPSWENDQRFKEYDQACDDAVYGHSVDDYDYGVSPGMEEYLYSRSRD
NSNKFAAYFHTDEDIEEVEEANEYNKDEKGELERARHDSSSFERPKLSDGDEKKLSSALD
EIRSIVGDQFTETEMVRMILRYNYDINAAVNGLLGASCPPSASTALPQRERRQRNKDSCI
LQLNSDYAVLPYHEFSPVLSFLDKQGKNLGKEAATGIRKLNLEKLGEQSSSNLSPSQVKQ
TNNVPVTVVATPNKGATPKVVRGFDIGQEDANSGQEGKLQPKIDPEERESRSSTPVRGDS
APSASKTPARLRDKEVDIEAKYKEERGDSKELINMVVVGHVDAGKSTLMGHLLYLQGNVA
QRTMHKYEKESKKLGKQSFMYAWVLDDTDEERSRGVTVDIAQRVFETESKRVTLLDAPGH
KDFIPNMITGAARADVAILVVDATTGAFEAGFDSGGQTREHAILIRSLGVSQIAVVINKL
DTTEWSQSRFKDICSSLKNFLKSVGFREGDVMYIPCSGLTGENLVKKSSVEELNSWYKGP
TLIEAIDKMKVPERNVTKPSRLCASDVYKGQGANMCVAGRLETGYVQNGDRLFLLPQGEV
LTVKGVQVEGAGVGCAFAGDHVSLTVSGCDPGVLHIGDFLCDPTNPIPLVTRVQARVVIF
SVAVPLIKGSQVDFHYQAVTEPAKIHKLVSQLHKTTGQVIKSKPRALVKNTSALIELKFS
RPMCLELYRDVKELGRFMLRMGGSTIAAGLVTQILEAN
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaagtacaaggaaatacagtcagaggtaccgtccatcatgggaaaatgat
caacgttttaaagaatatgatcaagcatgtgatgatgctgtgtatggacattctgtggat
gactatgattatggagtgtctccagggatggaggagtatctctacagcaggagtagggat
aactccaataaatttgcagcatacttccatactgatgaggacatagaggaagtggaggaa
gcaaatgagtacaataaagatgagaaaggagagttggagagggcaaggcacgattcgtca
agttttgagcgacctaagctatcggatggcgatgagaaaaagctgtcatcagcattggat
gaaatacgaagcattgttggagatcaattcactgaaacagaaatggtgaggatgatcctg
cggtacaactatgacatcaatgcagcagtgaatggtcttcttggagctagttgcccaccc
tcggcaagtacagcattgccacaacgagagaggcgtcaacgtaataaagattcttgtatt
cttcagttgaatagtgattatgcagtcttaccataccatgaattcagtcctgtacttagc
tttttagataaacaagggaaaaatttaggcaaagaagcagctacaggtattagaaaacta
aatctagaaaagttaggagagcagtcttcaagtaaccttagtccatcccaggtgaagcag
acaaataatgttcctgtgacagtggttgctactcccaacaaaggtgccacaccaaaggtg
gtgcgtggctttgacattggacaggaagatgcaaactcaggccaggagggaaaattacag
ccaaagatagacccagaggaacgggaatctcgttcatctactccagttcgtggtgattct
gcacctagtgccagtaaaactcctgccaggctaagagataaggaggtggatattgaggcc
aaatacaaagaggaaaggggagatagcaaagaacttatcaatatggtagtggttggtcat
gttgatgctggcaagtctacattaatgggtcacttgctataccttcagggaaatgttgct
cagagaacaatgcacaaatatgaaaaggaaagtaaaaagcttgggaaacaatcctttatg
tatgcctgggtactggatgacactgatgaagaaaggtctagaggagtcactgtagatatt
gcccaaagggtttttgaaactgaatccaaaagagtaactttacttgatgctccgggtcac
aaagacttcattccaaacatgattactggggcagccagggcggacgttgccatccttgtc
gtagatgccacaacaggagcttttgaagctggttttgatagtggaggccaaactcgagaa
catgccattctcatacgttctctaggtgtttctcaaattgcagtagtcattaataaatta
gacaccacagagtggagccaaagccgatttaaggacatctgtagtagtcttaagaatttt
ctcaagtcagtgggtttccgggaaggagatgtcatgtatattccctgctcaggacttaca
ggagaaaaccttgtaaagaaatcatcagtagaagaattgaactcatggtataaaggacca
actctaattgaagctattgataagatgaaagttccagagagaaatgtaacaaagccaagc
cgcttgtgtgcaagtgatgtctacaagggccagggtgcaaacatgtgtgttgcagggcgt
ttagagacaggttatgtccaaaatggagatagattgtttcttttaccacagggagaggta
cttacagttaaaggtgtccaggttgagggtgctggtgtgggatgtgcctttgctggagat
catgtgagtttaacggtatcgggctgtgacccaggggttttacatattggcgacttcctt
tgtgatccaaccaaccccattccacttgttacaagggttcaggcacgagttgttatattt
agtgtagcagttcccctaattaagggctcccaggttgattttcattatcaagctgtaact
gagcctgcaaaaatccacaagctagtttcacagttacataaaaccacaggacaagttata
aagagtaagccaagagctttagttaaaaatacttctgcactaatagaattaaaattttca
agacctatgtgtttagaattgtatagagatgtcaaggaattaggaaggtttatgcttcgt
atgggaggctcaactattgctgcaggacttgtaacacagattttagaagcaaattaa
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