Oratosquilla oratoria (Japanese mantis shrimp): 143031699
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Entry
143031699 CDS
T11268
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143031699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oot03041
]
143031699
Spliceosome [BR:
oot03041
]
Complex B
Other components
Prp19-related factors
143031699
Complex C
143031699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
zf-CCCH_2
RRM_YTH1
RRM_occluded
zf-CCCH
RRM_5
zf-CCCH_4
RRM_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
143031699
NCBI-ProteinID:
XP_076051984
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All DBs
Position
12:50124358..50129977
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AA seq
502 aa
AA seq
DB search
MAMSKSTNTYNRQNWEDADFPILCQTCLGDNPYVRMMREKFGKECKICTRPFTVFRWCPG
ARMRFKKTEVCQTCAKMKNVCQTCLLDLEYGLPTQVRDAALNLQDDMPKSDVNKEFYIQN
MERQMAATSDGATAAGALGKTKSHSEMLLRLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLLKRAAAMPRLEPPEDKSITTLYVGNL
GERIADKELRDHFYQYGEIRSINVVSKQQYAFVQFTTRSSAELAAERTFNKLIIQGRRLN
IKWGKSQARLGAPGEGGNEIIDTARPLEPVPGLPSLPPPPEELQNNYFNLSSKPSSIPLP
PGQAPQQQQQQQQQQQQQQQALPPTAAAVAAAAAAAAAAGGIVPPRPPPPGTAPPPPLTT
PRPPPGMPPPAPPGHLPPLPPPPFFPPHLRAPLRPPPGLRPPNYFPQPPPIPGVGPPPPL
SQAVIHYPSQDPTQMGANPDSK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtccaaatctactaacacatacaatcgacaaaattgggaagatgctgacttc
ccaattctgtgccagacgtgtctgggcgacaatccgtacgttcgcatgatgcgtgagaag
ttcggcaaagagtgcaagatttgcacgcgacctttcaccgtctttcgttggtgccctggg
gcccgtatgcgcttcaagaagactgaagtgtgccagacctgtgctaaaatgaagaacgtc
tgccagacatgtctcctcgacttggagtacggtttgccaacacaggttcgagatgccgca
ctaaatcttcaagacgacatgccaaaaagtgatgtcaacaaggagttttatatccaaaat
atggagcggcaaatggcggccacttccgacggtgccacggcggccggtgcactggggaag
accaagtcacacagcgaaatgctcctccgcctggcccgcacaacaccatactacaagcgc
aaccgtcctcacatctgctcgttttgggtgaagggggagtgcaagcgaggcgaagagtgt
ccgtacagacacgagaagcccacggatcctgacgacccactggcagaccagaacatcaag
gaccgctattacggcgtcaatgaccctgtcgccgacaaactgctcaaacgggcagcagcc
atgccaaggttagaaccgccagaggacaagtcaatcacgacactatacgtaggtaacttg
ggcgaacgcattgccgacaaggagctacgggatcacttctaccaatatggcgagatccgg
agcattaatgtcgtgagtaagcagcagtacgccttcgtgcagttcaccacccgcagttct
gcagagctggccgctgaacgcacgttcaacaaattgatcattcagggaaggcggctcaac
atcaaatggggtaagtcgcaggccaggctcggggctcccggcgagggaggcaatgagatt
attgacacggctcgtccgctggagcccgtgccagggttgccgtcactccccccaccaccc
gaagagctgcagaacaattacttcaacctgtcgtcaaaaccctccagtatcccattacct
cctggtcaggctccgcagcagcagcaacaacagcaacaacagcagcagcagcagcaacag
gcactccctcccactgcagcagctgtggcagctgcagcggcggcggcagcagccgccgga
ggcatcgtacctccaagaccaccacccccgggaaccgcacccccacctccgctcacgact
ccccggccacctcccggaatgcctccgccagctcccccgggacacttgcccccacttcct
cctccaccctttttcccgcctcacctgcgagctccacttcggcccccgcccggcctacgc
cccccgaactacttcccccagccgcccccaatccccggcgtgggaccccctccgccactc
tcgcaggcagtcatccactacccgtctcaggacccaactcagatgggggccaatccagac
agcaaatga
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