Oratosquilla oratoria (Japanese mantis shrimp): 143033446
Help
Entry
143033446 CDS
T11268
Symbol
SoxN
Name
(RefSeq) SRY-box transcription factor soxNeuro isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oot03000
]
143033446 (SoxN)
Transcription factors [BR:
oot03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
143033446 (SoxN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
143033446
NCBI-ProteinID:
XP_076055014
LinkDB
All DBs
Position
15:complement(47816602..47895107)
Genome browser
AA seq
463 aa
AA seq
DB search
MLALDPPDLKGGSLHSSHLPPHSHSHSHSHTHSVSHSHHNSHSHSHPLSHHTSHSSLTAL
SSNLSSTLSSPSLGSVGSMSAHSPPQTHVPTSNNNNNTTTTNNNTGSTTNSSSTNSSSNK
SSSAAAANAAERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKR
PFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYPLASGLMHTDPTRPPVQQVTRDM
YNMTNGYMPNGDYADYGYGYETAAYGSQSYPYMTGQVYGGYDMTRGYSPTSTSTPSYMNG
SAYSSAMYASAPSPYSMSQMTMASVGSVGSVGSSASHSPTSIKSETPTLPVSPGAAMPPS
AAHSTPGEYATGVMKREYVGSGGGGTTAAAAAAAAAAAAATGQQQGDLSQMISMYLPGSQ
DRNDHHKAATAAAAAAYMSQAQYHAHSASTDQMPPAPMPLAHM
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccctcgatcccccggacctcaaggggggcagtttgcattcctcacacctgccc
ccacactcccattcccattcccactcccacacccattccgtgtcacactcccatcacaac
tcccattctcactcccatccgctatcccaccatacctcgcactcctccctaacagccctc
agctccaatttgtcctctaccctgtcttcgccctcgttgggctccgtgggcagcatgagc
gctcactccccaccacagacccatgtgcccacctccaacaacaacaacaacaccactacc
accaataacaacaccggctccaccaccaacagttcgagtaccaacagctcgagcaacaag
agcagctcagcggcagctgccaacgcagctgagcgggtgaagcgtcccatgaatgccttc
atggtttggtcccgcgggcagagacgcaagatggctcaggagaacccgaagatgcataac
tccgagatctccaagcggctgggcgccgagtggaaactcctcagcgagacggagaagcgg
cccttcatcgacgaagctaagcggctccgtgcagtgcacatgaaggaacacccagactac
aagtacagaccgcgccgaaagaccaagacgctcatgaagaaggacaagtacccactggcc
tcgggtctcatgcacacagacccgacgcgccctcccgtccaacaggtgacccgtgacatg
tacaatatgaccaacggctacatgcccaacggcgattatgccgactatggctacggatac
gaaacggctgcgtacggaagtcagtcatacccgtacatgactggtcaagtgtacggcggg
tatgacatgacccgcgggtactccccaacttccacctccactccctcctacatgaacggg
tcagcttattcctcggccatgtacgcgtccgcaccgtccccctactccatgagtcagatg
accatggcatccgtgggttccgtcggctccgtcggatcctcagcctcccactcgcccacg
tccatcaagtccgagacgcccacgcttcccgtctcaccgggcgcagccatgcctccgagc
gcggcgcacagcacgccaggtgaatatgcaacaggcgtgatgaagcgggagtacgtgggg
tcgggcggcggcgggacgacggcggctgcggctgcggcggcggcggcggcggcagcggca
acggggcagcagcaaggagacctttcgcaaatgatttccatgtacctgcccgggtcacag
gacagaaacgaccaccacaaagctgcgaccgccgccgcagctgcggcatacatgtcccaa
gcccaataccacgcccactccgcctcaaccgaccagatgccgcccgcgcccatgcccttg
gcccacatgtaa
DBGET
integrated database retrieval system
