Oratosquilla oratoria (Japanese mantis shrimp): 143033831
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Entry
143033831 CDS
T11268
Symbol
fra
Name
(RefSeq) neogenin protein frazzled isoform X1
KO
K06766
neogenin
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
143033831 (fra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oot04515
]
143033831 (fra)
Cell adhesion molecules [BR:
oot04515
]
Immunoglobulin superfamily
DCC/UNC5 family
143033831 (fra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Neogenin_C
ig
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
Fn3_VIN3
Ig_RIMBP2
C2-set_2
Interfer-bind
C2-set
Fn3_Dep-1_3rd
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
143033831
NCBI-ProteinID:
XP_076055480
LinkDB
All DBs
Position
16:complement(12646585..13216355)
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AA seq
1439 aa
AA seq
DB search
MGERALGVLVLVCLSVGLAPRLCTANKGTSHNVWTDWAGLEFTLEPRDTVVMKGDPASLQ
CAAQGSPSPAISWRKDNFLIDISLDDRKSIGLNGTLHLDRVQSRDGRRDAGDYQCQASIP
GVGTILSTMAKLQVAASWDDALPKFDEHPEDLQVFEGERARLACSIKGNPEPTIAWYKNN
HPLSLDPSRMTLLPSGSLEIENVAMSDKGQYQCVASSLDKSKKSKEAVLTVQPALALRDP
SPPNFIAVPQPIVAKVGETITLDCAANGYPLPTVVWLKDGATIDMAHLDSRFLFLGTTQS
LQIFNIEEQDKGTYMCRAENREDSLDASAHVHVQVTPRFVQKPKNTIAYEKEDIELECDV
YGRPQPTISWLKDGELIIESEYFQYVNGNNLKILGLVVTDAGMYQCMANNPAGNIQTSCQ
LKVLQQAGTTESPGNSTPISTLPQEEILSENGSVPVSENSQMPSEPRMLEAVMTSNRFVT
LSWREPQMNNALINGYSVYYRQEGSQRERVQNVSASSSSQSFDEYKTQISNLAPGSTYKV
RVMAYTVTGLLGPSSPEIVVRTRPDVDLPAAPEDLKVMATSPTSLHVSWEPPENSKTPIR
GYTMYYMEVGSAEEHELEVFETQYDLHNLNEYTEYSVWMVARSDNGPGDSTYEVSARTFS
DVPTAQPQNVTVEAASSKSLIIRWEPPPTDHQNGVITGYKIRYKKKDKGKGRTKTTDGNR
RLYALTGLNKRTTYAVRVSALTVNGSGPATDWILADTFSNDLDENRVPDKPSSLKAQPLA
NSITVIWKPPESQDVMVRGYTIGWGRGIPDVYSKLVDSKQRHYLIDGLEPNAEYVISLRA
YNQMGDGQPIYDQVRTSEPEEDNTASLTPPVGLKALVLTPFTVALQWTDTTLNRNQIVSD
DRYYTVRYTTYAQASSSTPRYKYQNSTEVTSLIDNLKPNTVYEFAVKVIKKRRESRWSLV
ASNTTMEAKPSSPPRDITVVTISNDPTTVVLNWQPPKQPNGQISGYFIFYTTDANGDWVM
EEDSGDRMTFTIRGLTPSTLYYYKMQARNNKGFGPFSPVSNFTTLPGVGMMREQRGWFLD
ESSLIVLIAVSAAGALVFVGSIVAVFVYCRKVKPRRRPTQPLSFHSGSPLNKMSKVEIKP
PDLWIHHDQMELKNMDKNDRNESPNPTTIINHSGPEYEPDDKNTTYTSTSTLDRRTPYQS
TYLRDQLSEDETDKLLNRRSLKTKPLVIPLDCNKDTVVGGSTSSSVYSDGTLGRPSYSVP
QYSSAGPGVYTPTENPYGTNPNSGMGNAGNMPYESLPPPPQSTQPLLGSLAGPTTSLGQY
SSLSGEGSNTLGKRKGNPLRSFSVPAPPQSAPTTPQPKHIGAISPFKKLSGSSAPSTSCQ
VPAQRRVGAVTRVDSLPEHEEISEALLHGYSNEELSQEMANLEGLMKDLSAITAQQFNC
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagagcactgggcgtgcttgtgttagtgtgtctatcggttggactcgctccc
cgtctctgcactgctaataaaggcacttcacataacgtatggacagattgggcgggcctc
gagttcaccttagaaccgcgggacactgtggtgatgaaaggtgacccagcatctctccag
tgtgctgcacaagggtccccgtccccagccatatcatggagaaaggataattttcttatt
gacatctcacttgatgacagaaagagtataggtctcaatggaacacttcacctggaccgg
gttcagagtcgagatggacgcagggatgcaggtgactaccagtgccaggcatccatccca
ggggttggtacaattctctccaccatggccaaattacaagtggcagccagctgggatgat
gcattacccaaatttgatgaacatcctgaagatttgcaagtatttgagggagaacgagct
cgacttgcctgtagcattaaaggcaatccagaaccaacaattgcatggtacaaaaacaac
catcctctctctcttgacccatccagaatgaccttgcttccttcaggatcactagaaatt
gaaaatgtagcaatgtctgacaaggggcagtaccaatgtgttgcttcaagtttagacaaa
agtaagaaatccaaggaagctgtgctgacagtacaaccagcacttgcattacgagatcct
tcgcctcccaacttcatagctgtgccacagcccatagttgctaaagttggagaaactatt
acccttgattgtgctgcaaatggttaccctttgccaactgtggtatggctgaaagatggt
gcaacaattgatatggctcacctggattcaaggtttttgtttcttggaacaacacaaagc
ttacagatttttaatattgaagagcaagacaaaggcacgtacatgtgtcgtgcagaaaat
agagaagactcattagatgcttcagcacatgtccatgttcaagtgacacctcgatttgta
caaaaaccaaagaacacaattgcctatgagaaagaggatatagagttagagtgtgatgta
tatgggcgtccgcagccaaccatttcctggctcaaggatggagaattgattattgagagt
gaatactttcagtatgtaaatggaaacaacctgaaaatccttggccttgttgtgacagat
gctggaatgtatcagtgtatggccaacaacccagccggcaatattcagacctcctgtcag
ctgaaggtgctacagcaagcaggtacaactgaatcccctgggaacagcactccaatcagc
acccttccacaagaggaaattcttagtgaaaatggatctgtgccagtgagtgagaattca
cagatgccatcagaaccacggatgctggaagctgtgatgacaagcaaccggtttgtcact
ttgtcatggagagaaccacaaatgaacaatgcccttatcaatggctactctgtgtattac
agacaagagggatcacagagagaacgagtacagaatgttagtgccagttcatcaagccag
tcttttgatgaatacaaaacacaaatcagtaacttggcaccaggtagtacctacaaagta
cgtgtcatggcttatacagtaactggactcctaggaccttcaagtccagaaatagtcgtg
agaacaaggccagatgtagacttaccagctgctccagaagatttaaaagtaatggctaca
tcaccgacctctttacatgtgtcatgggaaccaccggaaaacagcaaaactcccattcga
ggatatacaatgtactatatggaagttggatctgctgaagagcatgagctagaagtattt
gagacacagtatgatcttcacaacttgaatgaatatacggagtacagtgtgtggatggtt
gctcgtagtgacaacggacctggtgactcaacttatgaagtctctgctcgaacattctct
gatgtgccaactgctcagccacagaatgttacagttgaagctgccagttcaaaaagtctt
atcatccgttgggaaccaccaccaactgatcatcagaatggtgttattactggatataag
attcgttataaaaagaaggacaaaggtaaaggcagaaccaaaactactgatggtaatcga
agactgtatgctttgacaggacttaacaagagaacaacatatgctgttagagtttcagct
ttgacagtaaatggctctggccctgctactgactggattttggctgacacattttcaaat
gacttggatgagaacagagtacctgataagccatcctcactcaaagcacaaccattggca
aattctatcactgtgatatggaagcctccagaatctcaggatgttatggtcagaggctac
acaattggctggggcagagggattcctgatgtatactccaaacttgtggacagcaagcaa
cgacattatctcattgatgggctggaaccaaatgctgagtatgttatcagtttacgagca
tacaatcaaatgggtgatgggcagccaatttatgaccaggtgcgaacaagtgaaccagaa
gaggataacactgcatcacttacacctcctgttggactcaaagcacttgttcttacacct
ttcacagttgcccttcaatggactgacacaaccttgaacagaaatcagattgtatcagat
gaccgatactatactgttcgctacacaacatatgcccaagcatcatcatctacaccacgc
tacaagtaccagaattcaactgaggtgacaagtcttattgataacctcaagcctaacact
gtatatgaatttgcagttaaagttatcaagaaaagaagagaatcacgttggagtcttgta
gcttcaaataccacaatggaggccaaaccatcttcaccgccccgagacatcacagttgtt
accatatccaatgatcccaccactgttgtgctcaattggcagcctccaaaacaacccaat
ggacagatctctggttactttatcttctacacaactgatgcaaatggagactgggtaatg
gaagaagactcaggagatcgaatgacttttacaatccgagggttgactccatcgacttta
tattactataagatgcaagctcgaaataacaagggctttggtcccttttcaccagtttca
aacttcacaacactaccaggcgttggaatgatgagagaacaacgtggatggttcttagat
gaaagtagcttaattgttttgatagctgtgagtgcagcaggagctttagtttttgtgggc
tccattgttgctgtctttgtatactgcaggaaagttaagcccagaagaaggcccacacag
cctctgtctttccacagtggttccccactcaacaaaatgagtaaagtcgaaatcaaaccc
ccggacttatggattcatcatgaccagatggaactgaaaaacatggacaaaaatgaccgt
aatgaatcaccaaatccaacaaccatcatcaaccattcaggtcctgagtatgaacctgat
gacaaaaacaccacttacacctccacctccaccctagatcgtcgtaccccctaccagtcg
acctacctgcgtgaccagcttagtgaggatgagacagataagctccttaatcgccgctcc
ttgaaaaccaaacctttagtaattcctttggattgtaataaagacacggtggttggtggc
agtacttcaagtagtgtatacagtgatggcacactaggccggccatcatattctgttcct
cagtattcatcagctgggcctggggtctatacaccaactgagaacccgtacggaacaaat
ccaaatagtggtatggggaatgcaggcaacatgccatatgaaagcttgccccctcctcct
cagtcaacacaacctctccttggtagtcttgctggaccaaccacatctcttggccaatat
agctccttaagtggtgagggcagcaacacattaggcaaacgtaaaggcaaccctcttcga
agttttagtgtaccagcacctccacagtctgctcccaccaccccacaacctaaacatatt
ggagccatcagtccattcaagaagctgtcaggctcatctgcacccagcacatcttgccaa
gtgccagctcagcgcagagtaggagctgttaccagagtagattccctgccagaacatgaa
gagatcagcgaagcactacttcatggctactcaaatgaagaactgtctcaggaaatggca
aacttggaagggcttatgaaagatttatcagctataacagctcaacaattcaattgctga
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