Oratosquilla oratoria (Japanese mantis shrimp): 143033862
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Entry
143033862 CDS
T11268
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase 25E
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03013
Nucleocytoplasmic transport
oot03015
mRNA surveillance pathway
oot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143033862 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
143033862 (Hel25E)
03015 mRNA surveillance pathway
143033862 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143033862 (Hel25E)
03041 Spliceosome [BR:
oot03041
]
143033862 (Hel25E)
Enzymes [BR:
oot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143033862 (Hel25E)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143033862 (Hel25E)
Spliceosome [BR:
oot03041
]
Complex C
Other components
EJC/TREX
143033862 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143033862 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
143033862
NCBI-ProteinID:
XP_076055540
LinkDB
All DBs
Position
16:complement(28954534..28973573)
Genome browser
AA seq
425 aa
AA seq
DB search
MAEQEPELLDYEDDDPAETAETEPTEAPAKKDVKGTYVSIHSSGFRDFLLKPEILRSIVD
CGFEHPSEVQHECIPQAVLGMDILGQAKSGMGKTAVFVLATLQQIDSVDGQVSVLVMCHT
RELAYQIAKEYERFSKYMPTIKVGVFFGGMNIQKDEETLKNNCPHIVVGTPGRILALIRN
KKLNLRHLKHFVLDECDKMLEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKVKENEKNRKLFELLDALEFNQVVIFVKSVQRCMA
LAQLLVEQNFPAIAIHRAMAQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITKVSDENDAKILNEVQERFDVNITELPDEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaggaacctgagcttttggattacgaagatgacgatcctgcagagactgca
gaaactgaacccacggaagccccagccaagaaggatgtaaaaggaacttacgtttctatc
cattcatctggcttcagggacttcttgctgaaaccagaaattctcagatccattgttgac
tgtggttttgagcatccttcagaggtccagcatgaatgtattccccaagcagtgttgggc
atggacattcttggccaagccaaatctggaatgggcaaaacagctgtttttgttcttgct
accctgcagcagattgactcagtggatggtcaggtgtcggtgcttgttatgtgtcatacc
cgagagctggcttatcaaatagccaaggagtatgagcgtttcagcaagtacatgcccacc
atcaaggttggggtgttctttgggggaatgaacatccaaaaggatgaagaaactttgaag
aacaattgtcctcacattgtggttggtacccctggacgcattttggctttaatccgaaac
aagaagttgaatttgagacatttaaaacattttgtgttggacgagtgtgacaagatgttg
gagcagttagacatgcggcgtgatgttcaggaaatcttccgcaacacaccccatgagaag
caagtgatgatgttcagcgctacactcagcaaggagatacgcccagtttgcaagaagttc
atgcaagatccaatggaagtgtatgttgatgatgaagcaaagttgaccctccacggtctg
cagcagcattatgtcaaggtcaaggagaatgagaagaacagaaagttgtttgaactgctt
gatgcccttgaattcaaccaggtggtgatatttgtgaagtctgtacagcgttgcatggca
ttagcgcagctgctggtggaacagaatttcccagccattgctatccacagagccatggct
caggaagaacgtttaagccgctaccaacagttcaaagacttccagaagagaatactggtt
gcaacaaatttgtttggtcgtggtatggatattgagagagtgaacatcgtgtttaattat
gatatgcctgaagacagtgatacatacctccacagagtagccagagctggcaggtttggc
acaaagggtttggcaatcaccaaagtgagtgatgaaaatgatgcgaagatacttaatgaa
gtccaggaacggtttgatgtaaacatcactgaattgcctgatgaaattgacctgtcttcg
tacattgaaggccgttag
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