KEGG   Oratosquilla oratoria (Japanese mantis shrimp): 143034457
Entry
143034457         CDS       T11268                                 
Symbol
CstF50
Name
(RefSeq) cleavage stimulation factor subunit 1 Cst50
  KO
K14406  cleavage stimulation factor subunit 1
Organism
oot  Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oot00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    143034457 (CstF50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oot03019]
    143034457 (CstF50)
Messenger RNA biogenesis [BR:oot03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     143034457 (CstF50)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd CSTF1_dimer WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_Aladin CFAP251_N NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_DCAF4 WD40_RFWD3 Ge1_WD40 ASA1 Beta-prop_SCAP WD40_MABP1-WDR62_1st DSE1_N PAC11 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_RSE1_2nd Cytochrom_D1 Beta-prop_WDR11_1st Beta-prop_EDC4L
Other DBs
NCBI-GeneID: 143034457
NCBI-ProteinID: XP_076056650
LinkDB
Position
17:complement(18187342..18203509)
AA seq 430 aa
MKEEEKKEDKNKVKQRELLYKLIISQLFYDGHQKLAQELAVAVNHETTAVAPSDRLMTVV
IVGVQHEHEAERPLNRLEYTLGPGIDLEYETEPQTSAPEPAMYETAYVTSHKDKCRAGAF
SADGQLVATGSVDASIKILDVDRMLAKSDPDAVELHPDAVVGHPVIRTLYDHLEEITCLE
FHPREQVLISGSRDTNVKMFDFSKTSAKKAFKTFTDAEQVTTLSIHPGGDILAVGTEGSV
VRVYDINSCQCYVCPYPREHHTGSITCVKYSSDARLYASASRDGHIKLWDGVSGRCVQTF
SKAHDGAEVCSVLFSRNGKYVLSAGMDSNVKLWEISTARCLMAYTGAGSVGKQEHSAHAM
FNHTEDFVMFPDEATTSLCAWDARNAIRKNLLSLGHNGPVRHMVHSPCSPSFITCSDDFR
ARFWYRRNVH
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgaaggaagaggagaaaaaagaagataaaaacaaagtaaagcagagagaactgctttac
aaactaattataagtcagttgttctatgatggacatcagaagttggcacaggaattagca
gtggctgtcaatcatgagaccacagcagttgcaccttctgaccgactcatgactgttgtt
attgttggtgttcagcatgaacatgaggcggaaagaccgctcaaccgattggagtacaca
cttggtccagggattgatctagaatatgagacagaaccacagacctcagcccctgaacct
gctatgtatgaaacagcgtatgtgacatctcataaggataaatgcagggctggagccttt
tcagctgatggtcagctagttgccacaggaagtgttgatgcttctataaagattttagat
gttgatcggatgttggccaagagtgatccagatgctgttgaacttcaccctgatgctgtt
gtgggtcatcctgtcatcagaacattgtatgatcacctggaagagattacctgcctggaa
ttccatcctcgtgaacaagttctcatatcgggcagcagagacacaaatgtcaaaatgttt
gatttcagcaaaacttctgctaagaaggcatttaaaacctttactgatgccgagcaggtg
accactctctctattcacccaggtggagacattctagctgtgggtactgaggggtctgtg
gtacgtgtatacgatatcaattcctgtcaatgctatgtctgcccctaccctagggagcac
cacacaggctccatcacatgtgtgaagtattcctcagatgcccgcctctatgcctcagcc
tccagggatggacacattaagctatgggatggtgtctctggaagatgcgtgcagacattc
tccaaggctcatgatggggcagaggtttgctcagtgctcttttcacgtaatggaaagtat
gtgttgtcagctgggatggacagcaatgttaagctgtgggaaatatcaacagctcgatgt
cttatggcctatactggtgctggatctgtaggaaaacaggaacacagtgctcatgccatg
ttcaaccacactgaggacttcgtcatgttcccagatgaagctacaacgtcactctgtgcc
tgggatgctcgcaatgctatcaggaaaaacctactttctctaggtcataatggtcccgtg
cggcacatggtgcattctccgtgctcaccctccttcatcacgtgctctgatgatttcaga
gcaaggttctggtacagaagaaatgtccattag

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