Oratosquilla oratoria (Japanese mantis shrimp): 143034608
Help
Entry
143034608 CDS
T11268
Symbol
hrg
Name
(RefSeq) poly(A) polymerase hiiragi isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143034608 (hrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143034608 (hrg)
Enzymes [BR:
oot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
143034608 (hrg)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
143034608 (hrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
TrmB
Motif
Other DBs
NCBI-GeneID:
143034608
NCBI-ProteinID:
XP_076057038
LinkDB
All DBs
Position
17:complement(34924857..34964999)
Genome browser
AA seq
1003 aa
AA seq
DB search
MDGKSNDKLENNKTLGMTSAISLAYPKPADLEKTKDLKDYLVEASMFESDVDFNHRLEVL
GKLNVLVKKWITEVSLQKNVPPQLADSVGGKISTFGSYRLGVAGKGADIDAVCVAPRHIE
RSDYFTTFYELLKKQPEVSEMRAVEEAFVPVIKMKYDGIEIDMLFARLALKEINDSVDLR
DDTILKNLDEKCVRSLNGCRVTDEILRQVPNRENFRLALRAIKLWAKRHGVYSNVLGYLG
GVSWAMLVARTCQLYPNASAATLVEKFFLVFSKWTWPAPVYLKQPSDGKLGFKVWDPRVN
VQDRFHLMPIITPAYPQQNSTFNTSQSTRAIMMEEFKIGLQITEDIMLAKATWDKLFQPP
NFFGKYKHYLMVIAGAQTPEDHLEWYGLVESKIRHLISGLEQNGAVKTIHINPTAFTTLD
PEYQNKAHSAWFIGVEFKKSESTPNIDLTQEINKFVEVVYKQSNYNKAYKEGMEVNCKYV
KKKQLSSFLSQETLDYYKPKGEDGQPRALSTKRKSDCNLDTSATDMTDTKKLKVDSSDDH
SVKSQANGDDSMSNMSFDEGYSNSPTTTINSPNLPSEINSQTQVLVTCTSGADTLRALHL
ASPCNTQQQEQEHQPLPNSLATYCYMFLAPMSNVSQSPPLFHHPHPQLLPSVSPYTPPLP
PLPTHGGHLTPMSSHNHIHPLVASHQHTHPSVSPHNHLLSQLSPLRHSMSLVSPDLEGAC
SASGSHCHHSSPHPHPFTFLTHHHLPQVSPQIRPLPQVTTEHHISHASTPEHQKLALSHP
PPGMHQHLCTMYHKSCGCCSPHCIPSDILPYGAPNSILCCDTHNLASPIQQHTMVTVPHQ
VNTQGFDSCQVLPSSPTTPPPPRPPPASPLIPSPTTLRNTPPPAVHIPQASKGVISHSII
TPYSCISPQEQRNEFNADRNITQFLPTVKDKNIKRGEPNCCQKPKARNNAVSFTRPIIKP
SHLILARQRLSSKELHDVLTPDPFDLVRHTWDVKFHFKKCGSE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaagagtaatgacaaactggagaacaacaaaacactgggtatgacctcagcg
atcagtttagcttatcctaaacctgctgatttggagaaaacaaaagacctgaaagactac
ctggttgaagctagtatgtttgaatcggatgtggacttcaatcacagacttgaagtcctg
ggcaaactgaatgtgcttgtgaagaaatggataactgaagtgagtctacaaaaaaatgtt
cctccacagcttgctgactccgttgggggcaaaatatctacctttgggtcatatcgtttg
ggtgtggcaggaaagggagctgatattgatgctgtctgtgttgccccaagacatattgaa
cgtagtgattactttaccactttttatgaactactcaaaaaacagccagaagtttcggaa
atgagggcagtggaagaagccttcgtacctgtaataaagatgaaatatgatggtattgaa
attgatatgttgtttgcaagacttgcactcaaagaaatcaatgactcagttgatcttcgg
gatgacactatcttaaagaatttggatgaaaaatgtgtgcgaagtctcaatggctgtaga
gtcactgatgaaatcttgcgtcaagtgccaaatagagaaaacttcagacttgctttaaga
gccatcaagttgtgggcaaagagacacggagtctacagcaacgtcttgggttacctcggt
ggtgtgtcctgggcaatgttggttgcccgtacatgccaactttacccgaatgcttccgca
gcaactttagtggagaagttcttcttggtcttttcaaaatggacttggccagcgccagtt
tacctaaaacagccgtctgatgggaagcttgggtttaaggtgtgggatccaagggtcaat
gtgcaagacagatttcaccttatgcccatcatcacaccagcgtatccacaacaaaattcc
acattcaacacatcccagtccactcgagctataatgatggaggaattcaagataggactg
cagatcacggaagacataatgttggccaaagcaacgtgggacaaactcttccagccacca
aacttctttggcaaatacaaacactacttaatggtgatagcaggagcacagaccccagaa
gaccatctggaatggtatgggttggtcgagtccaaaattcgccatctcatcagtggtttg
gagcaaaatggcgccgtgaagacaatccacatcaatccaactgcgttcacaacgttggac
ccagaatatcagaacaaggcccactctgcctggtttataggtgttgagtttaaaaagtct
gaatctacgccaaatatagatctgacgcaagaaatcaacaaatttgtagaagttgtttat
aaacagagtaactacaataaagcctataaagaggggatggaggtgaattgcaaatacgtc
aaaaagaaacagttaagcagcttcctttcacaagaaacactagactactacaagccaaaa
ggagaggacggtcagcccagggcactttctaccaaaaggaaatcggactgcaacctagac
acttctgctacagacatgacagatacaaagaaattgaaagtagattcatcagatgaccac
tcagtcaagagccaagcaaatggagatgattcaatgtccaatatgtcatttgatgaaggc
tattccaattctcccaccactacgattaattctccaaacttgccgtcagagattaactca
caaacacaggtgttggtgacgtgcaccagtggagcggacaccctgagggccctgcacctg
gcatcaccttgtaacactcaacaacaggagcaggaacatcagcctctaccaaattctctt
gccacttactgctatatgtttttggcacccatgtctaatgtgtcgcaatcacctccactt
ttccatcatccacatcctcaacttctaccctctgtctcaccctataccccacctcttcct
ccactacccacccatggggggcacctcactcccatgtcatcccacaatcacatacatcca
ttagtagcatcacatcaacacacccatccgtcagtgtcaccccacaaccacttgctatcc
caattgtcacccctcagacactccatgtcattagtgtcccctgacctggagggggcttgt
tctgcatctggtagtcattgtcaccactcatccccccatcctcatccttttacattttta
acacatcaccacttacctcaggtgtcaccacaaatccgacctctccctcaggttactact
gagcatcacatttctcatgcatccacaccagaacaccaaaaacttgcactctcccatcct
ccccccggtatgcaccagcatctctgtacaatgtatcacaaaagttgtggatgctgtagt
ccccattgcattccaagtgatattctgccatatggtgcacccaatagtatattgtgttgt
gacacccataatcttgccagtccaatccaacagcacaccatggtgacagttccccaccaa
gtgaacacacaaggctttgactcatgccaagtacttccttcttctcctactactcctcct
cctcctcgtccccctcctgcgtctcctcttatcccgtcacccaccacactccgcaacaca
cctccacctgctgttcatataccccaagcttccaaaggagtcatctctcattccatcatt
accccctattcatgcatttcacctcaagaacaacgcaatgaatttaatgcagacagaaac
atcacacaattcctacccacagtaaaagataaaaatataaaaaggggagaaccaaactgc
tgccaaaaacccaaagctcgcaataatgctgtgtcttttacaaggcccatcatcaaacca
tcacaccttattcttgcaagacagaggttatcaagcaaagaacttcatgatgtgctaaca
cctgacccctttgatctcgtgaggcacacttgggacgtcaagtttcattttaagaagtgc
ggttcagagtaa
DBGET
integrated database retrieval system
