Oratosquilla oratoria (Japanese mantis shrimp): 143037600
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Entry
143037600 CDS
T11268
Symbol
Cpsf5
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143037600 (Cpsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143037600 (Cpsf5)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
143037600 (Cpsf5)
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
143037600
NCBI-ProteinID:
XP_076062185
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Position
22:56058032..56085023
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AA seq
232 aa
AA seq
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MATQRKANAPAGWPKNATQPSFGAKYNGNPSSALNRTINLYPLTNYTFGTKDPLFEKDPS
VPARFQRMREEFEKIGMRRSVEAVLLVHEHGLPHVLLLQLGTTFFKLPGGELNSNEDEVE
GLKRLLTETLGRQDGIAQDWLIEDVIGNWWRPNFEPPQYPYVPSHITKPKEHKKLFLVQL
GEKGRNKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFHFVFK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcaaagaaaagcaaacgctcctgcggggtggccaaaaaatgcaacacagccg
tctttcggagcaaagtacaatggaaacccatcttctgctcttaatagaactattaacttg
tatccattgacaaactacacatttggaaccaaagatccactctttgaaaaagatccgagt
gtcccagcaagatttcagcgaatgagagaagagtttgagaagattgggatgcgaaggagc
gtggaggcagttttgctggttcatgaacatgggttaccgcacgttctcctccttcagtta
ggcaccaccttcttcaagttgccaggaggagaactcaattcaaatgaggacgaggtggaa
ggattgaagcgtcttctgaccgaaaccttggggagacaagacggcattgcgcaagactgg
ttgattgaagatgttattgggaactggtggcgacccaacttcgaacctcctcagtatcca
tatgtcccctctcacataacaaaacccaaggaacacaaaaaattgttcctagtgcagttg
ggagaaaaaggtaggaataaagcactctttgcagtaccgaaaaactacaaattggttgca
gctccgttgtttgagctgtacgataattctcaaggttatggacccatcatttcatcattg
ccacaagctttgtgcaggttccattttgtgtttaagtga
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