Oratosquilla oratoria (Japanese mantis shrimp): 143038336
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Entry
143038336 CDS
T11268
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03008
Ribosome biogenesis in eukaryotes
oot03013
Nucleocytoplasmic transport
oot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143038336
03015 mRNA surveillance pathway
143038336
03008 Ribosome biogenesis in eukaryotes
143038336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143038336
03009 Ribosome biogenesis [BR:
oot03009
]
143038336
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143038336
mRNA cycle factors
Stress granule specific factors
143038336
Ribosome biogenesis [BR:
oot03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
143038336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
LRR_Zer-1
LRR_9
UBA_8
Motif
Other DBs
NCBI-GeneID:
143038336
NCBI-ProteinID:
XP_076063481
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Position
24:complement(43799968..43801962)
Genome browser
AA seq
664 aa
AA seq
DB search
MPMGGSSRYPNVYKKVRNDNSRHYFELDERDTNVGSGGGNGGRNWRRDNYWGKQRGGHNR
YDDDRYHGQEGRRGGRGGSSQRGRGRVSNNDGRDYPNRLQEVYQRSRGRGRGSKRPTHPP
KAITDLGWHKIIVRNGAQYPKEEILRAIRNLVEEPFIPISMDLERSDFVFYLEDNGRAAR
AITQVSRRIAMPNGHRLVFHTNQSVPPIRKLTPLQLEKIKLVMSNRYSPEMARLNLKNFH
NDPELTKEEIFCPLYRAHNMTTILGIIISHIPEVRHIDFSHNKVQQLEELKPLLTNCHSL
KRLSLEYNRLHHVESLKHLTGLHLTELVLEGNEVCNKYNDPDTYISAVRKYFPKLQYLDG
HELPKTIGFEVDEDPPKLPPSQPAYFCDQLAKGVAIEFIRQYYQIFDTACRTPLLAAYTD
DAVFSLSTALSESKAGARLVTRYVQENRNLKKVTSPEQRHKTLIKGNKNIIDTLSRLPGT
VHDPGSFLIDIPWVAPHLMHVVLSGLFCQDGAKLQQVRSFTRSLIIVKQGEGYCILNEEL
FVTYATASQVKSFKSNTSASSQPTPVTAPPVQAHVSSPPPVPVAPVQITSPLAPPTSEET
ALAALQPIQVQMIKHFSQVSGMRFQYSRMCLQENQWDYQKAGQLFQDLHKKGQVPAEYFK
HPPN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgggaggtagttcaagatatccgaatgtttataaaaaggttcgcaacgataac
agtagacattattttgaacttgatgaaagggacacaaatgttggaagtggaggaggaaat
ggaggcagaaactggagaagagataactactggggaaaacaaagaggtggtcacaatcga
tatgatgatgacagataccatggacaagagggccgacgtggtggaagaggtgggtcatca
caaagaggacgtgggagagtttcaaataatgatggaagggactatccaaacagacttcaa
gaagtgtatcagaggtcaagaggcagaggacgtggctcaaagcgcccaacacatccaccc
aaagctataacagaccttggatggcacaagataattgtaaggaatggagcccaatacccc
aaagaagaaatacttcgagctattagaaacttggtggaggaacctttcataccaatctct
atggatcttgagcgaagtgactttgtattctatttagaagacaatggccgagcagctcgg
gctattactcaagtctctcgtcgtattgcaatgcccaatggccacaggcttgtctttcat
accaaccaatcagtcccacccattagaaagctcacgccactgcagcttgaaaaaattaag
ttggtcatgagcaaccgctatagtcctgagatggctagattgaatctcaagaatttccac
aatgatcctgagcttacaaaggaggagatattctgtccactatatcgggcccacaatatg
accaccattcttggaatcatcatatcgcacattcctgaagtgcgtcatattgatttcagc
cataacaaagtgcaacaactagaagaactgaaacctcttcttaccaactgccatagctta
aagcgtttaagcctagagtacaacagactacatcatgttgagtccctgaagcatctgact
ggattgcatctcactgaacttgtgctagagggcaatgaggtctgcaacaagtacaatgat
ccagatacctacattagtgctgtcaggaagtacttccccaaacttcagtatttggatggc
cacgaactaccaaagacaattggctttgaagtagatgaggatcctccaaagctaccacct
tcacaaccagcctatttctgtgatcagcttgcaaagggtgttgctatagaattcattcga
caatattaccagatatttgacacagcctgtagaacacctttactggcagcttacacagat
gatgctgtgttctcactctcaactgcattgtcagaaagtaaagcaggtgcaaggttagtt
acaaggtatgtgcaagagaaccgtaatttgaagaaagtgactagtcctgagcagcgacac
aagactttaataaagggtaacaagaacattattgataccttgtcaaggctaccaggaaca
gtacatgacccaggctcctttcttatcgacattccatgggtggctccacacttgatgcat
gtagttcttagtggtcttttctgccaagatggggcaaagctgcagcaggtaaggtccttt
acacgctctctcataattgtcaagcaaggagaaggttattgcatattaaatgaagaactc
tttgtcacatatgctactgcgtcacaagtaaagtcttttaagagtaatacatcggcatca
tcacaacctactccagtcacagcaccaccagttcaggcacacgtgtcttcaccaccacca
gtaccagttgcaccagtacaaataacatcacctcttgcacctcccacgtcagaagaaact
gctttggcagctttacaaccaatccaagtacaaatgatcaaacacttttcacaagtctct
gggatgcgtttccagtattcacgaatgtgccttcaagaaaaccaatgggactatcaaaag
gctggacagttattccaagacttgcacaagaaaggtcaagtcccagcagaatacttcaaa
catccaccaaactga
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