Oratosquilla oratoria (Japanese mantis shrimp): 143038605
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Entry
143038605 CDS
T11268
Symbol
Tbp
Name
(RefSeq) TATA binding protein isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143038605 (Tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oot03000
]
143038605 (Tbp)
03021 Transcription machinery [BR:
oot03021
]
143038605 (Tbp)
Transcription factors [BR:
oot03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
143038605 (Tbp)
Transcription machinery [BR:
oot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
143038605 (Tbp)
RNA polymerase III system
TFIIIB
143038605 (Tbp)
RNA polymerase I system
SL1/TIF-1B
143038605 (Tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DDHD
MDM10
EPL1
Peptidase_S64
Tim54
PAT1
Tra1_central
SOG2
TFIIA
Lin-8
DOCK_N
DUF4770
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
143038605
NCBI-ProteinID:
XP_076064162
LinkDB
All DBs
Position
2:43287966..43325695
Genome browser
AA seq
328 aa
AA seq
DB search
MDNMLPSPEYSIPSIGTPLPHPGEEDMILPSAQQQQQQSAQQQQQQQQQHQQQQQQHQQQ
QQPQQQQQTQQQQTQQQQTQQAFGSGFTPHSLMQPHTPNMLSPAPGGPGGSVGMFGSATG
PSTPATGNPMTPSDLYIIPQLQNIVATVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRI
REPRTTALIFSSGKMVCTGAKSEDHSRLAARKYARIVQKLGFTAKFLDFKIQNMVGSCDV
KFPIRLEGLVLTHSQFSRNGEDGEKSLRAASMGPFAVRDLIPDTARFCNSCRKIITFWGK
YYRLTEVYRCTLLCLKFKSINFMIANGI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggataatatgttaccatctccggagtacagcatacccagtattgggactccattacca
catcctggtgaagaagacatgatattaccatcagcgcagcaacagcaacaacagtcagca
cagcaacaacagcagcagcaacaacagcatcagcaacagcagcaacagcatcaacagcaa
cagcaaccacagcaacaacaacagacccaacaacaacagacccagcaacaacagacacag
caagcatttggcagtggatttactcctcacagtctgatgcagcctcacactccaaacatg
ttgtctcctgcccctggcggtcctggtggaagtgtggggatgtttggctcggccacagga
ccatcaacaccagcaactggtaaccccatgacacctagtgacctatatattatcccacaa
ctacaaaatattgttgcaactgtaaaccttggctgcaagttggatttaaagaaaattgct
ctccatgcacgaaatgcagagtacaatcctaagcgatttgcagctgtcattatgcgtatc
agggaaccaagaacaacagcactcatattttcttctggtaagatggtttgtacgggtgcc
aaaagtgaagaccattccagattggctgcaagaaaatatgctagaattgttcaaaaactt
ggattcaccgccaaattccttgacttcaaaattcagaacatggttggcagttgtgatgta
aaattccccattcggttggaaggtctggttctcacacacagccagttcagtagaaatgga
gaagacggggagaaatcacttcgggctgcatcaatgggacctttcgcggtgagagatttg
ataccagacaccgccagattttgtaattcttgccgaaaaataattactttttggggcaag
tattatagacttacagaggtatatcgttgcacattattgtgtctaaaattcaagtcaatt
aatttcatgattgcaaacggcatatag
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integrated database retrieval system
