Oratosquilla oratoria (Japanese mantis shrimp): 143038625
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Entry
143038625 CDS
T11268
Symbol
PolE1
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03030
DNA replication
oot03410
Base excision repair
oot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143038625 (PolE1)
03410 Base excision repair
143038625 (PolE1)
03420 Nucleotide excision repair
143038625 (PolE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oot03032
]
143038625 (PolE1)
03400 DNA repair and recombination proteins [BR:
oot03400
]
143038625 (PolE1)
Enzymes [BR:
oot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
143038625 (PolE1)
DNA replication proteins [BR:
oot03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
143038625 (PolE1)
DNA repair and recombination proteins [BR:
oot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
143038625 (PolE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Toxin_28
Motif
Other DBs
NCBI-GeneID:
143038625
NCBI-ProteinID:
XP_076064206
LinkDB
All DBs
Position
24:complement(50376827..50427700)
Genome browser
AA seq
2269 aa
AA seq
DB search
MPLQNTGKYRQERWEKKNAQNDGDERGDDNGSDRRLQQSLENDGIDAKYGFNRYKDPVPK
VGWLLNMHPTEVLDEDKRLVSAVDYYFIQEDGARFKVSLPYRPYFFVMTHKDVIQDMTTF
LTKKFSGHLAGVEVVKKEDLDLDNHLTGLKQTLLKLSFLTVNDLVKVRQVINGAVKRNKE
AIKLKTAYSEMLANQFAGETTDPTRKKQDPFENLFDIREYDVPYHVRVSIDLKIFVGLWY
SVCGGGGNRPPIITQREDILVWPDCIVLAYDIETTKLPLKFPDAASDQIMMISYMIDGQG
FLITNREIVGEDVEDFEYTPKPEFEGPFTIFNEPNEMALIQRFFDHILEVRPHIFVTYNG
DFFDWPFVEARAGFHGLDMFQEIGFQKNNQGVYAARPAIHMDCLCWVKRDSYLPVGSQNL
KAVAKAKLRYDPVELDPEDMCRMASEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTI
IPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQESVLNKLTSNGQVLDSETYVGGHV
EAIESGVFRADIPCRFRVVPEACQKLMDNVDRTIKFCVEVEEGIPLTEVTNYEEVVNDIK
KKLADLRDVPCRQENPLIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDFNKPGATCQ
RKMAWYWRGEVMPASRSEFQRIQQQLEIERFPPAFPGGDPRPFHQLNKEEQAAVEKKRLQ
DYCRKAYKKTHVTNTQEKWQTICQRENSFYVNTVRDFRDRRYEYKGLAKGAKKDVAEAQA
KGDPSEIKAANARAVLYDSLQLAHKCILNSFYGYVMRKGSRWHSMEMAGIVCYTGATIIT
RAREIVEQIGRPLELDTDGIWCILPGSFPENYVIKTKSKKVTISYPGAILNVMVKDIYTN
HQYHDLVNPETLEYSVRSENSIFFEVDGPYLSMILPASKEEGKKLKKRYAVFNFDGSLAE
LKGFEVKRRGELQLIKIFQSSVFEAFLKGDSLETCYASVAKVADYWLDVLYSKAANMPDS
ELFDLISENRSMSRKLEDYGSQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPDGA
PVTERAIPLAIFQAEASVKHHYLRRWLKDPSLINFDIRNVLDWNYYIERLSGTVQKIVTI
PAALQGVANPVPRVTHPEWLYKRVREKNDTFKQKRITDMFSVVKKPKPNAPVNEEPVEDS
EKDLFASQPDIEDMLTTKSMNSKVPSVANKRKRPAEADNKVSELSKSWREVLGNPPSMGN
TNDQLQAWIRFQKKKWEFQAKQRETRGKRSRTGDYSSTSADSGASSGRAGHVVRSGPSST
IGGFLRKTQRTLLDVPWEIIQIVETNNPGHFKVWALLGNDLHLIKLVIPRIFYVNQRTPK
VESGDRVWRKANKTLPRSHPVANLYEYSVPEEVYKQHSSALMADLSKPDIEGIYETQVPL
MFRALVQLGCITEVDRAITKQDTDTFELAQLKFKTLAQYQYLEPGHLRHLYFYQYKSGNK
SVLSVFIPATKKAHVFVVDTVKSNQMPNLNTLYNNERNLKIRKMGSEEQIPELDYSFSIK
FETELRPVYKHVQDVLQAYKDERKGPTYIAVQSQLDFTTLTTLMPGLGEFPMVPVHVLDK
ENMYSVLDWQRVGSRTLIRHYLGLEQILHTTLEQCRYFHIPIGNLPQDTTIFGADLFYAR
HLQKHNCILWCSPTHRPDLGGKEHDDNRLLGELEEKGRGEVNNSGCYTSVCFELDIESLA
VNTILQAYRINDIEGTSSSVAFDAMPQASLEEMMGGAESTLTAYDETARCAGAFRIVRQM
VATWLRDVTMYQNVFADFQIVHFYRWLHNPSSLLYDPALGRILNTLMQKLFLHLISEFKR
LGSIIVFANFNKILVCTKKRTIEDAMSYMEYIVASIRGKELFHSIDISFSNCWQFLMWLD
SANHGGFKGNLPEGVMQSFAEDKDDNESEEAGSKQQGPGEDGTDNDEAVIDMNWNLSEYL
PEWCGCHTSFNAVVASFISAAFDKLQEEGRNFTPGNTPIKRKSGTQTNRNPQSALQGYIE
FVQDLIAGEMAQKLYFVTQKIKGKATSSQAPVEDDTGPFGLHTNKTNPPLQFVISVCKVL
SLETAVTEQVNKLRRDLLKILNLSEFSPLAEWKDPSVSFVLPEVICRSCNHCRNIDLCKD
PHQAVNNRVRMWLCPVCNTSYKNTEIEFLLIGIVQTKSMACTLQDLQCDRCSQIKQPNMK
HYCTCGGRFHPLLKRQEFSEKMNIFSHIAHSCNMPLLQESVDWIVKGNA
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcagaatactggaaaatatcgacaagagagatgggagaagaaaaatgctcaa
aatgatggagatgaaagaggtgacgataatggatctgacagacgactgcagcagagcctc
gaaaatgatgggattgatgcaaaatatggatttaaccggtacaaagatccagtgcctaaa
gtgggctggctcttaaacatgcatcctacagaggtattagatgaggacaaaaggcttgta
agtgctgtagattactatttcattcaagaagatggagcacgattcaaggtatcactgcct
tatcgtccctacttttttgtcatgactcacaaggatgtaattcaggatatgaccaccttc
cttaccaaaaaattctcaggacatctagctggagtggaagttgttaagaaggaagacctt
gatctggacaaccatctaacagggctcaaacaaaccttgctgaagttgtcatttttgacg
gtcaatgatcttgtaaaggtgcgtcaagtgataaatggtgccgtaaagagaaacaaagaa
gccatcaagttgaaaacagcgtacagtgaaatgctggccaaccagtttgcaggcgaaacg
acagacccaactcgaaagaaacaggatccttttgaaaacctcttcgatattcgtgaatat
gatgtcccataccatgtgagagtgtccattgaccttaaaatctttgtgggtctttggtat
tctgtatgtggtggtggaggcaataggcctcctatcatcactcaacgagaagacatactt
gtgtggccagattgcattgtattggcatatgatattgaaactaccaagctgcctctaaaa
tttcctgatgctgctagtgatcagatcatgatgatttcatatatgattgatggacagggc
tttcttattaccaatcgagaaattgttggtgaagatgtggaagactttgaatatacacca
aagcctgagtttgaaggacctttcaccatttttaatgaacccaatgaaatggcactcatt
cagcgattcttcgatcatattcttgaggtgcgaccccacatctttgtgacgtacaatgga
gacttcttcgattggccctttgtggaagcccgtgcagggttccatgggttggacatgttc
caagaaattggtttccagaagaataaccaaggggtgtatgctgccagacctgctattcat
atggactgtttatgctgggtgaagcgagattcatacctacctgtgggttcacagaatctg
aaggctgtggctaaggcaaagttacgctatgatccagttgagttggaccctgaagatatg
tgccgcatggcttcagaacaacctcaggtgctttccaattattcggtatctgatgctgtt
gcaacctattacttatacatgaagtatgtgcatccttttatctttgccttatgcaccatc
atccctatggagccagatgaggttctaaggaaaggctcagggacattgtgtgaagcttta
ttgatggtgcaggcataccatgccaatatcatatttcccaacaaacaggagtcagtactg
aacaaactgacaagtaatggtcaggtcttggactcggagacatatgtaggaggacacgta
gaagccatcgagtcaggtgtcttcagggcagacattccatgcaggtttagagtggttcct
gaagcttgccagaaactgatggacaatgtggaccgtactattaagttctgtgtagaagtt
gaggaaggtattccccttacagaggttacaaactatgaggaggtggttaatgatatcaag
aaaaaattggcagatctacgtgatgttccatgccgacaggaaaacccgttgatttatcac
ttggatgttggtgcaatgtaccccaacattattctcacaaatcggcttcaaccctctgca
atggtagatgagacagtgtgtgctgcctgtgacttcaacaaaccaggtgctacctgccag
agaaagatggcttggtattggagaggagaggtcatgccagcatcccgcagtgaattccag
cgcattcagcagcaattagaaatagagcgatttccaccagcctttcctggtggggatcct
agaccttttcatcagctaaacaaggaagaacaagctgcagtagagaagaaacgacttcaa
gattattgtcggaaagcatacaaaaaaacacacgttaccaacacacaagaaaagtggcag
acaatctgccagagagagaatagcttttatgttaacaccgttcgtgacttcagagatcga
cgctatgagtacaagggccttgccaagggagccaagaaggatgttgctgaagctcaagct
aagggagatccatctgagattaaagctgcaaatgccagagcagttttgtacgactcactc
cagctggcgcacaagtgtattcttaactcattctatggatacgttatgaggaaagggtca
cgctggcattccatggaaatggctggcattgtatgttatacaggcgctaccattatcacc
agggctagggaaattgtggaacagattggtcgacctcttgaactggacactgatggaatt
tggtgtattctgccaggctccttcccagagaattatgtaataaaaaccaaaagcaaaaaa
gtgaccatatcttacccaggtgccatccttaatgtcatggtgaaggatatatacactaat
caccagtaccatgatcttgtgaatcctgagacgctagaatactctgtaaggtctgaaaac
tctattttctttgaggttgatggtccatacctgtcgatgattctaccagcatcaaaggaa
gaaggcaaaaaactaaagaaacgctatgctgtctttaattttgatggatctcttgctgag
ttgaagggttttgaagtaaagagaagaggtgaacttcagttgattaagatattccagtcc
tcagtatttgaggcttttttgaaaggagatagccttgaaacctgctatgccagtgtagct
aaggtcgcagattattggcttgatgtcctgtacagtaaagcagccaacatgccagattct
gaattgtttgacctcatatctgagaaccgatcaatgagccgtaaactggaagactatggt
tctcaaaagtctacatcaatatcaacagccaaacgtttagcagagttccttggagatcaa
atggtaaaagatgcaggtttgagctgtcgtttcatcatctcgaaaaaaccagatggggca
ccagtcactgaaagagctatcccactggccatcttccaggcggaggcatcagtgaaacac
cattatctccgtcgttggctcaaagatccatcacttatcaattttgacatcagaaatgtc
cttgactggaattattatatagaaagattgtctggaacagttcagaaaattgttacaatt
ccagctgctcttcagggtgtagcaaatccagtgcctcgggtaactcatcccgagtggctt
tacaagagagtgcgtgaaaaaaatgacacctttaaacagaagcgtataacagacatgttc
tctgtagtgaaaaaaccaaaaccaaatgctcctgtgaatgaagaacctgtggaagattct
gaaaaagatctctttgcttcacaacctgatattgaggatatgctaacaacaaagagcatg
aattctaaagttcctagtgtggccaacaaaaggaagaggccagcagaggctgacaacaaa
gtatcagagctgagcaagagctggagggaagtccttggaaaccctccttctatgggaaat
actaatgaccagctgcaagcatggatcaggttccagaaaaagaaatgggaatttcaagcc
aagcagcgtgagactcgtggtaaaaggtcacgcacaggagactattcgtcaacatctgct
gatagtggtgcaagcagtggcagggctggtcatgttgtgagatctgggccttcctccacc
attggtggcttcctccgtaaaacacagcgtactttgcttgatgtcccatgggaaatcatt
cagattgttgaaaccaacaaccctggtcactttaaggtttgggctctgttgggtaatgat
cttcatcttattaaactggtcatcccaagaatattttatgtcaaccaacgcacacctaaa
gtagaatcaggagaccgggtgtggaggaaggccaacaagacccttccgcgatcccatcct
gtagccaatttgtatgagtacagtgtaccagaagaggtatacaaacaacacagtagtgct
ttgatggcagatttgtctaaaccagacatagaaggcatctatgaaactcaggttccgctc
atgttccgtgcactagtgcaattgggctgcatcacagaggtagatcgtgccatcactaaa
caagatactgacacctttgaattggcacagctcaaattcaaaactctagctcagtaccag
tacctagaacctggtcatttacgacatctctacttttatcagtataagtctgggaacaag
tcagtgcttagtgtttttatcccagccactaaaaaagctcatgtctttgtggttgacaca
gttaagagtaaccagatgccaaatcttaacacactttacaacaatgaaaggaacttgaaa
atcaggaagatgggctctgaagaacaaattcctgagttagactatagcttttctataaaa
tttgaaacagagttgcggccagtttacaaacatgttcaagatgtgcttcaggcttataaa
gatgaaaggaaggggccaacctatattgcagtccagtcacagttggactttacaaccctg
acaacacttatgcctggccttggcgaatttcccatggtgcctgtgcatgtgttagacaaa
gagaatatgtacagtgtgctagactggcagcgtgttggatcacgaacattgatccgtcat
tatttaggattggagcagatcctgcatacgactctcgagcagtgccgatactttcacatt
cccattgggaaccttccacaagacaccacaatttttggggctgatctcttttatgcacgg
cacctacagaagcataactgtattctctggtgttcgcccacacacaggcctgacttggga
ggaaaagaacatgatgataacaggctcttgggagaactggaggagaagggtagaggggag
gtaaacaactctggatgctacactagtgtctgttttgaactggatattgaatcattggca
gtgaacactatcttacaagcataccgcatcaatgacattgaaggcacaagtagcagtgtt
gcctttgatgctatgcctcaagcctccttagaagaaatgatgggaggagctgaatcaacc
ctcacggcatatgacgaaactgcccgctgtgcaggagccttcaggattgttcgacaaatg
gttgctacttggcttcgtgatgttaccatgtatcagaatgtgtttgcagattttcagatt
gttcatttttatcgttggttacacaacccatcctcattactctatgatcctgcacttgga
cgtattctgaacacactcatgcaaaaactctttcttcaccttatttctgagttcaagaga
cttgggtccattattgtgtttgcaaactttaacaaaattctggtgtgcaccaaaaagaga
actatagaggatgctatgtcatacatggaatatattgttgctagtattcgggggaaagag
cttttccactcaattgacatctccttcagtaactgctggcagtttcttatgtggcttgac
tctgcaaatcatggaggcttcaagggcaatcttccagaaggagtgatgcagtcatttgcg
gaagataaggatgataatgaaagtgaagaagctggaagtaaacagcaaggcccaggtgaa
gatggaactgacaatgatgaggctgttattgatatgaactggaacttaagtgaatactta
cctgagtggtgtggctgccacacaagcttcaatgcagttgtggcatccttcattagtgca
gcattcgacaagctacaagaggaagggagaaacttcactccaggtaacactcctatcaaa
agaaagtccggtactcagaccaaccgtaatccacagtcagctttgcaaggatatattgag
tttgtgcaggacctcatagctggtgaaatggctcagaaattgtactttgtaacacagaag
attaaaggaaaggctacctctagtcaagctccagttgaagatgatacaggaccctttggt
ctacacaccaacaaaacaaacccacctcttcagtttgttatcagtgtttgtaaggttttg
tcacttgaaactgcagtgactgagcaggttaacaagttacggagagacttattaaagatt
ctgaacttgagtgaattttcacctttggctgaatggaaggatccttcagtatcatttgtt
ttgccagaggttatttgtagaagctgcaatcattgccgcaacattgacctttgcaaggac
cctcaccaggcagtgaacaatcgagtgcggatgtggttgtgtcctgtttgcaatacaagc
tataaaaatacagagattgaatttctcttaattggtattgtacagaccaagtccatggcc
tgtactcttcaggacttacagtgtgatcgatgttctcagattaaacaaccaaatatgaaa
cactactgcacatgtggaggacgtttccacccactcctcaaacgacaagaattcagtgag
aaaatgaacatcttcagccacatagcccattcatgcaatatgcccctcctgcaggaaagt
gtggactggattgtaaaagggaatgcatag
DBGET
integrated database retrieval system
