Oratosquilla oratoria (Japanese mantis shrimp): 143039536
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Entry
143039536 CDS
T11268
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143039536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143039536
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
143039536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_19
TPR_1
TPR_8
TPR_17
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_11
TPR_7
ARM_TT21_C
ANAPC3
DUF7017
ARM_TT21_5th
Fis1_TPR_C
FAT
TPR_20
NatA_aux_su
COG4_N
Alkyl_sulf_dimr
Coatomer_E
SIP
DUF7143
Motif
Other DBs
NCBI-GeneID:
143039536
NCBI-ProteinID:
XP_076065814
LinkDB
All DBs
Position
26:48925268..48986906
Genome browser
AA seq
1335 aa
AA seq
DB search
MGGAGDVKAALKLAKVAIKDGDYEEAVQQCKNALKIDRKNYQALVMMGRAMQELGKLEAS
KKSLMLASQTDPENPIAWQGLAMLCDKQPEISTPAEMIVIYTRMLDIVKDDEDKIDRMHR
KLAELHIENKDTGQAVTTLRTLIDKLKDEGKIKKAWKSLAQVLSSIEEPTQQEKTMLLEA
FPHILDESVLGENEKNYQRYLQLLYQSEMWQELVQACCTMASIFPTAHPLEWMARVFVKT
TQKDELEEVISVETFQPYLDRLLKLNDGSPWGNLARGILLEREGDLSLSKAHLRVGAIRL
GKSILAWKMLLRSQEMQNDWAGVDGTCRRCMDLKLDTSLPENLEFTRKLRLSHAKALCMI
GHERHLREALVILEKEGLDDLDQGLLLMNALINLGEFDKAYEHLKQLKEVHGEENPEVIL
LDAVIMRALGRADEAVAMLEGFVKTNPGSAQGYFELGRLYYASGNAQKSLMCCLKAAKIN
PKLAGAFLYLGHHYSSNDNTDKARKCYEKAFNLNPCCDETGAALSDTYRKLQDHEANMAL
LNRVTSEGQSPGGWAWLRLGLHYWAIQENQKAVQTFQHAVHISPRDSATYECLGDAYLAR
GAHAAALKVFTKALEIKPESLYPQYQIAHIKQMTGEYLEAISDYRNVLDKDLPPAIKVIG
LAGMAEVLISRARKYHEQFFFANVKDDCLQAIQALVRACSLRPNSPALWKLIGDACMLLS
PIPQSMAKFAIASKLLNPGMEDLEAMIEVDKLQVLQLGGRCYGLALQTSDDDAVLWHDLG
VVLFMQGCCIQEGHKEPLEQVAALSNRAVLAIKKSLSIEPAFAKAWASLGIIASHQSVDD
PALAQHAFITSLQYQSTAETWTLLGALYLQHDDAMLAHEAFAQAQAQDPAFVNCWVGQAL
VAEAVGHSETLDLFRHTTLLGIQTESCFGYGHHITHAASDPPVMKEDVRMKSTVAEAMHK
ASDCLQFYIRQKEEDTVGLNMAGLTAEIMGLKTTAIKIYQTALDRACQGEQIDDKLVDGI
RGNLGRILTSIGEVDEAIAMFKAIKQPDLFSQCGLALACLRAGKYEESYEGYTSALHWLA
PDDSQKSDVFVALATLQYKLQHKDEAKSLLFQSYQLSGASVRGLLALASLGLITEDSTLT
EAAMNELIPHAEAKHCLHHVAFLRATHALTKGDVKEASNILSRAIHKHPEVAPLWRVLAQ
LSLLRAGALRHYEKQMRDKLSTGALAAGAAGRVLTQAAATEDKQVVAQDAGMSVLACLHS
GNKKKSLVEAQRAVLMCPGAPQAWSAFIAAWFATKPSDKVVQHIGKLAKVWEKKAPSQVA
CWLRTVSRVAAEHGA
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgcaggagatgttaaagcagcactgaaattggcaaaagttgccattaaagat
ggcgattatgaagaagctgttcaacagtgcaagaatgcccttaaaattgaccgtaagaac
taccaggcacttgtcatgatgggaagagccatgcaggaactagggaaactagaagcatcc
aagaaatctctgatgttggcatcgcagacagatccagaaaatcctattgcatggcaaggg
cttgctatgttatgcgacaagcaaccagaaatttctaccccagcggaaatgattgtcata
tatacacgcatgctggacattgtcaaagatgacgaggacaagattgaccggatgcaccgt
aagctggcagaacttcatatagaaaacaaagacactggtcaggctgtgaccacacttcgc
accctcatagataaactcaaggatgaaggaaagataaagaaagcatggaagagtcttgcg
caggtattgtcttccatcgaagagcccactcagcaggagaagacaatgttactggaggcc
ttcccacatatattggacgagtcagttttgggtgaaaatgagaaaaattatcagagatac
ctacaattattgtaccaaagcgagatgtggcaagaactggtccaggcctgttgtactatg
gccagcatctttccgacagctcatccgttggagtggatggctcgtgtatttgtaaagaca
actcaaaaagatgaattggaagaggtgatatcagttgaaaccttccagccgtacctcgat
cggcttttgaaactaaatgacgggtccccatgggggaacttggcgcgcggtattctgttg
gagagagaaggggacttgtcactttccaaagcacatcttcgtgttggtgctatacgcttg
ggcaagagcattcttgcatggaaaatgcttctacgcagtcaggagatgcagaacgattgg
gctggcgttgacggcacctgcaggcgttgcatggatcttaaacttgacacatcgttgcca
gaaaatttggagttcacaagaaaattacgtttatcccatgcaaaagcactgtgcatgatt
gggcacgagaggcatctccgtgaagctttggtgattttagaaaaggaaggtcttgacgac
ctagatcaaggactgctgctcatgaatgccctcatcaacctaggagagtttgacaaagct
tacgaacacctgaagcaactgaaagaggtgcacggggaagaaaatcctgaagtcattttg
ttggatgccgtcataatgcgagctttaggaagggcagatgaagctgttgccatgcttgaa
ggatttgttaagacgaatccaggctcggctcaaggttattttgaactgggacgtctctat
tacgccagtggcaacgcacaaaagtccttaatgtgttgtctcaaagccgcaaagatcaac
cccaaacttgctggagccttcctctatcttggccatcattattcttcaaatgacaacacc
gacaaagccaggaaatgttacgaaaaagcttttaatcttaacccgtgttgtgatgaaaca
ggtgctgctctttcagacacctacagaaagcttcaagatcacgaagctaacatggcgcta
ctaaatcgtgtaactagtgaaggacagtcgccagggggctgggcatggcttaggcttgga
ctgcattactgggccattcaggagaaccagaaagccgttcaaacgtttcagcatgccgtc
cacatcagtcctcgtgacagtgctacatacgagtgtttaggcgatgcttacttggcccga
ggtgcccacgcagcggctctcaaagtcttcacaaaggcacttgagatcaaaccagaatca
ttgtaccctcagtaccagatagcacacatcaaacagatgactggcgaataccttgaggct
ataagtgactatcgcaatgtgctggataaggatcttcccccagcaatcaaggtcatcggc
ttggcgggcatggctgaagtgctcatttctcgtgccagaaaataccacgaacaattcttt
tttgccaatgtgaaagacgactgtcttcaggccatacaggcccttgtaagagcctgcagc
ctacgacccaacagtcctgccctttggaagctcatcggtgatgcctgtatgctccttagc
cccatcccgcagtcaatggctaagttcgccatcgcttccaaacttttgaacccaggaatg
gaagacctggaagccatgatagaagtggacaagcttcaggttcttcagcttggtgggagg
tgctacggtcttgcgttgcagacatccgatgacgatgcagtcctgtggcatgaccttggt
gtcgtattgttcatgcagggatgttgcatacaagaaggacacaaagaaccactggagcag
gtggcggctctaagtaatcgggcagttctagccatcaagaagagcctgagcattgaaccc
gccttcgcaaaggcttgggcatctctcggaattatagcctcccatcagagtgtagatgac
cctgcccttgcacagcacgcctttatcacgtcactacagtaccagagtactgcagagacg
tggaccttattaggagccctctaccttcaacacgacgatgcaatgctggctcatgaggcc
tttgctcaggcacaagctcaggatccggccttcgtcaattgctgggtaggacaggccctt
gtggcagaagctgtcggccactcggagacgctggatttgttccgtcacacgacgctgctc
ggcattcagacagagagttgctttggttacggtcaccacattactcatgcagcaagcgac
ccaccagtcatgaaggaagatgtgagaatgaagtcaactgttgcagaagcaatgcacaaa
gcttcagattgccttcaattctatatcagacaaaaagaggaggacacggttgggttgaat
atggctggcttaacagctgaaattatgggtctcaagacgacagcgattaagatctaccag
acagccctggacagagcctgtcaaggagagcagattgatgataaattggtggatggaata
cgaggcaatttaggacgaattttgacttccattggtgaagtagatgaagctattgccatg
tttaaagccatcaagcagccagacctcttctcccaatgtggccttgcccttgcctgtctc
agagctgggaagtacgaggaatcttatgaaggctacacatccgccctgcattggctggct
ccagatgattctcagaagtctgatgtttttgttgccttggcaacgttgcagtacaaactg
caacacaaagatgaggccaagagtcttctcttccaaagttaccaattgagcggagcttcc
gtccgtggtctgttggctctggcatcgcttggccttatcaccgaggattccaccctaacg
gaagccgccatgaacgagctcataccacatgcagaagccaagcattgtctccatcacgtg
gccttcctaagggcaacacacgctctcaccaagggtgatgtcaaggaagcatccaacatc
ctcagccgtgcaatacataaacatcctgaggtcgcccccttgtggcgagtccttgcccag
ctgtccttgctccgtgctggtgccctcaggcactacgagaaacaaatgagggacaaactg
agtaccggtgcactggccgctggggccgcagggcgagttttgactcaggcggcagcgaca
gaggacaaacaagttgtggcccaggatgctgggatgagcgtgctggcttgcctccacagc
ggcaacaaaaagaagagtttggtcgaggcacaacgagccgtgcttatgtgtccaggagcg
cctcaggcctggtcagccttcattgctgcctggtttgccacgaaaccgtccgataaggtt
gtgcagcacatcggcaaattagccaaagtctgggagaagaaagcgccgtcacaagtggcc
tgctggctgaggacagtgtctcgtgttgccgcagaacacggagcctaa
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