Oratosquilla oratoria (Japanese mantis shrimp): 143039971
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Entry
143039971 CDS
T11268
Symbol
Nup188
Name
(RefSeq) nuclear pore complex protein Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143039971 (Nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143039971 (Nup188)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143039971 (Nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
143039971
NCBI-ProteinID:
XP_076066581
LinkDB
All DBs
Position
27:38101406..38133063
Genome browser
AA seq
1613 aa
AA seq
DB search
MTTIISGKVLWTLVSGVSILPSDEVVGEELEAAAPHLRAALGSYKPAEKSVEAFNKESKL
ASNQKDLVAKLSKLLDLDAKQCWELFKLYLLYEFKGSQAALESILSSERELSILLANLLS
YYLSERLFTLRCLRHVLSNIGSARHPYQKLFQDFVRDVLDKDGSLGETLIKQLKEISIQS
PPTVQKNGPNLPPQAVTHWVKQNLCEQRELLVILLIYYSGTGKKCSPENFVKLLRYCHDT
GFGKRLGYNEHITESHRCLVELLAQTQCLLLVRLIDVDADPSTHDLCKSEWVSKIDPTMK
LLGSQPCHMPPLIAWFVVQQQRARADGAQKPEGMQQYLKMGRRALEGNVFQYLQSILDNP
VMQGDCLVFRVSSSIIYSLVCACGAAVDMEKAGVVLAITSVLEQCLEHEPPAHLFWLEEG
GAADLVVPSAIASFPLNYQPLLGLATALAKASPDSCSKVMELLGELPSITCQLSEEQLLY
LRVVESECLTTLSLTPFPGITIPASTHGTVMATSPAYVVTWQHSVNGWQLLLLAMENLDN
MLSSGSSEGSTSAVDMVTSILKLVIACVNVCPDQSPAFAHITDKVYAIVSRVANMTKPPP
LLVAALIEYLAQIAASDSQRIWSALEGCALFPSLPPSPKVVGGKRGKSDPLLGYRAGQLR
ALVCGGKKASGTFPILKSYMQLIVKGTMCGVNKSVVRGGVVFVVQEVLPMLLQWYCYSPN
ERIAVLQACLSLIHNTLVAPELEQELKDLVANFLLLAAPGITLLTVLASGYSSLESIMQE
EQAWDSGQSQQLTRTVKLALSILYRLTSFPIEGKSGVALLLSQIESLKSLGTNAGKPHLA
LLVARYIYHSVDPRLPNLALKILAKFAQELDVPLVACLGAEAEGIRDALLTRLDAAAEDV
QVKVAIVQLLTAATTHQPGLMRSFITPPDPCLETLVILLEKHAQCTSSSSRDLVGAITEL
MHSLWSKNYNVAKTHLRENKDFWTVLTHPLTKTKLGEVSDAVVANTMRVVALEYFMVTEK
VPGNLDKVMKEMTDEKANLICKWSKHVMRQTQMEAKGYMQLLSSWRDLLVVIVVRAKEVL
TKSQKNTIAMDVLEVIQEQLEESEPNSELLIVLGELYLSLVKNCGPLLVDDESIFGKLGQ
LLSRTRAGMPHIPAQCHALFLGAVLLALTNTKLSTSASAGAVQPLLDPVCSLAYQYCSRE
STPVSVLKLTVGLLHECLLRCPKDVFLPYIQTHAVISALLHAAKIHVQKENPDLVSEILY
LLSTLSQVKEAIDELNTETVAINISLPLSSQVSNMCTAEIIWLSCAVLATQGVTGVEGAI
DNVCLHLNQLTAALHAPHLHPKVAEAAAAVTAALAPHSNQWIVHNPTSYSQITQAVARCV
LVSAYLLRHPKIVQLDLTGADSSNSKDSTIGSSTATVLNQLLQVLSECLGALRAFSPDIT
ELLFKPGVDVGAWQQLLEPSFRPLTPEQPNAQLSFASCILVLDLYDSQMPKEFRGASPAR
GGGGAGGGGASGGGSSEICLNYDLLTQCMEEAFLLLISQAALFLLSPDTSPRDSHRIKRD
LKDELNSFFGRWIGRKIVPLPAMSSSSNNAVVHPDIGFLKLMQKLVDSLSNSK
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgactacaattataagtggaaaagtattatggacccttgtatcaggagttagtatccta
cccagtgatgaagtggtgggggaggaactggaggcagctgcccctcacctcagagcagcc
ttggggagctacaagccagcagaaaaatctgttgaggccttcaataaagaaagcaagtta
gcctcaaatcagaaggatcttgtcgccaaattgtcaaagttgttggatttggatgccaaa
cagtgttgggagttattcaaactttatctcttatatgagttcaaaggatctcaagctgct
ttggaatccatactatccagtgagagggagttgagcatactattggctaacctcttatca
tattacctcagtgagcgtctttttacacttcgttgtctccgccatgttctctccaatatt
ggtagtgcaagacatccataccagaaactgttccaagactttgtaagagatgtattagac
aaagatggttctctgggtgaaacattaatcaaacaactgaaagaaatcagcatccagagc
ccccccaccgtgcagaagaatggaccaaacctcccaccacaggctgtcacacattgggtg
aagcagaatttgtgtgaacaaagagaattacttgttattttactcatctattactcaggg
actggcaagaagtgttcaccagaaaattttgtcaagcttttgagatactgtcatgacacc
ggttttgggaaacgcttgggttataatgaacacatcactgagagtcatcgatgccttgtg
gaactccttgctcagacacagtgtcttctacttgtccgtctgattgatgtggatgctgat
ccaagcactcatgacctgtgtaaatcagaatgggtatcaaagatagatccaaccatgaaa
cttcttggatctcagccatgccacatgccacccttgatagcttggtttgtggtgcagcag
cagagagcaagggcagatggagctcagaagccagaggggatgcaacagtaccttaaaatg
gggcgtagggccctggagggaaatgtgttccagtatttacaaagtatcttggataatcca
gtgatgcagggtgactgccttgtatttagggtaagcagtagtatcatctattcactggta
tgtgcatgtggggctgctgtggatatggagaaggctggagtggtattagccatcacaagt
gttctagagcagtgcctggaacatgaacctccagctcatctgttttggttagaggaaggt
ggagctgcagaccttgtagtaccaagtgccatagcaagtttccctctgaactaccaacct
cttcttggcttagctacagctttggccaaggcttccccagacagctgcagtaaagtgatg
gaactactaggagaattgccctcaataacttgtcagctgagtgaagaacagctgttgtac
ctgcgggtcgtagagtctgagtgtctgaccacattatccttgacccccttccctggcatt
acaattcctgcaagcactcacggcactgttatggcaacaagtcctgcctatgttgttaca
tggcagcatagtgtcaatggctggcagctcttgttgttggccatggaaaaccttgacaac
atgttaagttcaggctcttcagaaggctctacatcagctgttgatatggttacttctatt
ctcaaactggtgatagcatgtgtgaatgtgtgcccagaccagagcccagcctttgcacac
ataactgacaaagtgtacgccattgttagcagagttgcaaacatgacaaagcccccacca
ttgttagtagctgccctgattgaatacttagcacaaattgcagcatcagattctcagcgc
atttggtcagctcttgagggttgtgccctgtttcctagtctgcctccttcaccaaaagtt
gttggaggcaaacgaggcaagtcagaccctttgcttgggtacagagccggacagttgcga
gcactggtgtgtgggggcaaaaaagcctctgggacctttccgatcctgaagtcatatatg
cagctcattgtcaagggtactatgtgtggagtcaataagagtgtcgtgcgtggtggggtc
gtttttgttgtacaagaagtgttgcctatgctgctgcagtggtactgttactctcccaat
gagcgcatagcagtcttgcaagcgtgcctgtccctcatccataacacacttgtggcccca
gaactagaacaagaattgaaggatttggtagccaacttcctgttgttagctgctcctggc
atcacactgttgactgtacttgccagtggctacagcagtttagaatccatcatgcaggag
gaacaggcatgggatagtggtcagtctcagcaacttacccgaactgtgaagttggctctt
tccatattatacaggttaacctcttttcccattgagggtaagagtggtgtggccttgctt
cttagtcagatcgagtccttgaaatctttaggaactaatgctggcaaacctcatttagct
cttctagttgctcgatatatctaccacagcgtggaccccagactgccaaatcttgccctc
aaaattctggctaaatttgcacaggaattggatgtaccacttgttgcttgtttgggcgct
gaagcagaagggatacgtgatgcattgctgactcgtcttgatgcagctgctgaggacgtg
caagttaaagtggctattgtgcaactactcactgctgccaccacacatcagccaggtttg
atgcgcagtttcatcactccaccagatccttgtttggagactctggtaatcctgctagaa
aagcatgctcagtgtacaagtagcagtagtcgtgaccttgtgggagcaattacagagttg
atgcattccctgtggagtaaaaactacaacgttgccaagacacatctacgtgaaaacaaa
gacttctggacagttcttactcatcctctcaccaagaccaaactaggtgaggtgtctgat
gcagttgtggcaaacactatgcgggtagttgctctagagtacttcatggtaactgaaaaa
gttcccggtaacctagataaggtcatgaaagaaatgactgatgaaaaagcaaatctaatt
tgcaaatggtcaaagcatgtgatgagacagactcaaatggaagcaaaaggctacatgcaa
ctcctctcttcgtggcgagacctgctggtggtcattgttgtaagggcaaaagaggtctta
accaaatctcaaaagaatacaattgccatggatgtgctggaggtgatacaggagcagctt
gaagaaagtgaacccaacagtgaacttttgattgtcttaggagaactttacctctcgttg
gtcaagaactgtggaccgctcctagtggatgacgagagcatttttgggaaacttggtcag
ctattgagtcgaactcgtgctggaatgcctcacattcctgcccagtgtcacgcccttttc
cttggagctgttcttctggccctgacaaacacaaagctcagcacctcagcctctgctggt
gctgtgcagccacttctagacccagtttgtagtctcgcttaccagtactgtagccgggag
tccaccccagtctctgtactcaagctgacagtcggattactacatgaatgtcttctgcgt
tgcccaaaggatgtatttcttccttatattcagacgcatgcagtcatctctgccctcctt
catgcagcaaagatacatgttcagaaagaaaatcctgatcttgtaagtgagattctgtac
ttactgtcaacacttagtcaagttaaagaagcaattgatgagttgaatacagagactgtg
gcaatcaatatatccctaccattatcgtcacaggtgagtaacatgtgtacagcagaaatc
atctggttatcgtgtgcagtgttagctactcagggagtgacaggagttgagggtgccata
gacaatgtttgtcttcacctcaaccaattaactgctgcccttcatgctcctcatcttcat
cctaaggttgccgaggctgctgcagcagtaaccgcagctctggccccacacagtaaccag
tggattgtacataatcctacttcatatagtcaaatcactcaggcagttgctcggtgtgtt
ttggtgtcagcttatcttttacgacaccccaaaattgtgcaactagatttgactggagca
gacagtagtaatagtaaagattccactataggctcatccacagcaactgtcctaaatcag
ctgttacaggtgttgagtgaatgtttgggagcattacgagctttcagcccagacattacg
gagttgctcttcaagcctggtgtggacgttggggcatggcagcaactgcttgaaccctcc
ttccgaccattgacccctgaacagcccaatgcacaactaagctttgcctcctgtatttta
gtattagacttgtacgacagtcaaatgcctaaggaatttcgaggtgcttcccctgcccgt
ggtgggggaggagcaggaggagggggggcatcaggtggaggatcttcagaaatttgtctc
aattatgatttgctgacccagtgtatggaggaagccttcctgctcctcatctcacaggca
gccctgtttcttctcagcccagacacgtcgccaagagactctcacaggatcaaaagggac
cttaaggatgaactaaactctttctttggaagatggattggtcgcaaaattgttccactg
ccggctatgtcctcctctagtaataatgcagttgttcatccagatattggctttctcaaa
cttatgcaaaaattggttgacagtctctcaaactcaaaataa
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