Oratosquilla oratoria (Japanese mantis shrimp): 143040252
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Entry
143040252 CDS
T11268
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03082
ATP-dependent chromatin remodeling
oot03083
Polycomb repressive complex
oot04330
Notch signaling pathway
oot04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143040252 (HDAC1)
03083 Polycomb repressive complex
143040252 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
143040252 (HDAC1)
04350 TGF-beta signaling pathway
143040252 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oot03036
]
143040252 (HDAC1)
Enzymes [BR:
oot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
143040252 (HDAC1)
Chromosome and associated proteins [BR:
oot03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
143040252 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
143040252 (HDAC1)
BRAF-HDAC complex
143040252 (HDAC1)
REST complex
143040252 (HDAC1)
SHIP complex
143040252 (HDAC1)
MiDAC complex
143040252 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
143040252 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
143040252 (HDAC1)
Chromatin remodeling factors
NuRD complex
143040252 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
143040252
NCBI-ProteinID:
XP_076067128
LinkDB
All DBs
Position
28:16799562..16828603
Genome browser
AA seq
488 aa
AA seq
DB search
MSAPQHSRRKVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
QDEMTKFHSDDYIRFIRSIRPDNMNEYNKQMQKFNVGEDCPVFDGLYEFCQLSSGGSIAG
AVKLNKQACDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESI
FVPIMTKVMETYQPSAIVLQCGADSLSGDRLGCFNLTIKGHAKCVEFVKKYNLPLLLLGG
GGYTIRNVARCWTFETAVALNSDIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVPTIAIPEDGVAEESEDEDKANPDERISIRASDKRIAPDNEY
SDSEDEGDNRRDERSFKPKKKTKMEDGNAANAANSGGANDEKKDGALGALKDDKGNSQIG
QNDTKVES
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccacaacacagtagaaggaaagtctgttactattacgacagtgatatagga
aactattactatgggcaaggacatcccatgaaaccccaccgcatccgcatgacacacaat
ctcctccttaactatggactctacaggaaaatggaaatctatcgtccacacaaggccaca
caagacgagatgacgaagttccacagcgatgactacatccgctttattagatctatccgg
ccagataatatgaatgaatacaacaagcaaatgcaaaagtttaatgtaggtgaagactgt
ccagtgtttgatggtctctatgagttctgtcagctttcatctgggggttcaattgccggg
gctgtaaaactcaacaagcaagcatgtgatattgctgttaattgggcaggtggcctacat
catgccaaaaagagtgaggcatcaggcttttgctatgtgaatgacatagtgttggccatt
ttggaactgttgaagtatcatcagcgagtcctgtatatcgacattgacattcatcatgga
gatggtgtggaagaagcattttacaccacggatagagttatgactgtatcattccacaaa
tatggagaatacttcccaggaactggagacttaagagatattggagctggtaagggcaaa
tactatgctgtcaacttccctcttcgagatggtattgatgatgaaagttatgaaagcatt
tttgtgccaattatgaccaaggtaatggagacttaccagccctctgctattgtccttcaa
tgtggagcagattctctctcgggtgatcgcctaggatgtttcaaccttacaattaaaggt
catgccaaatgtgtggagtttgtgaagaagtacaaccttcccctcttactactgggtggt
ggaggctacaccattcggaatgttgccaggtgctggacatttgagacagcagtagccctt
aactcagatattgccaacgaattaccctacaatgactactttgagtattttggcccagac
ttcaaattgcatatcagtccttccaatatggccaaccagaacacacctgagtacctagag
aagataaagacccgattgtttgaaaacctgagaatgttgccacatgcaccaggtgttcca
accatagcaattccggaagatggtgtggccgaagagagtgaagacgaagacaaagccaat
ccagatgagagaatttctattagagcctcagataagcgtattgctccagataatgaatac
tcagattctgaggatgaaggtgataataggagagacgagagatcatttaaacccaaaaag
aagaccaaaatggaagatggaaatgctgctaatgcagcaaacagcggtggagcaaatgat
gaaaagaaggatggagctttaggggcactgaaggatgacaaagggaactcacagattggg
caaaatgataccaaagttgaatcctga
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