Oratosquilla oratoria (Japanese mantis shrimp): 143040314
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Entry
143040314 CDS
T11268
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143040314 (htt)
04131 Membrane trafficking [BR:
oot04131
]
143040314 (htt)
03029 Mitochondrial biogenesis [BR:
oot03029
]
143040314 (htt)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
143040314 (htt)
Membrane trafficking [BR:
oot04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
143040314 (htt)
Mitochondrial biogenesis [BR:
oot03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
143040314 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_MROH2B_C
HEAT_GCN1
LTP_2
GNC1_N
Motif
Other DBs
NCBI-GeneID:
143040314
NCBI-ProteinID:
XP_076067325
LinkDB
All DBs
Position
28:37167485..37292900
Genome browser
AA seq
2957 aa
AA seq
DB search
MATLEKLVRAFEAVKVSQGVGNGGKGGGGGGGRVGTSGMSNAGLKVGLADRPMEHTSAMA
SLAATISQQGQGLLSKRDLVLNSRDKVAHCDVIGDALVGAKSGDIQKMLTVGMETLLLLL
DDDDPDVRMNADEALNRVVRGLSETHLGKIQVELYKEIKKNGPVRSLRAALNRFAVLCHH
IRPQKCRAYVQNLLPCLIRMARRQEEPLLETLASSLDKILPTLGHFTNDNEIKNLLKAFL
PNLSHSSAAVRRTAVTSLIALCRYSRKPSMFFLWLLNTTLQLLIPIQEDISVSLVLGCFL
CIRMLLPHLVPLTCQPSPLDPSSRGVSNMNIENIVSVDQMLQVYELCIHYSGHKDHNIVT
SSLEALQALLQSPPASLLMHITNPEGITRSRIFADPRASKLSSRAPSQISITPSLYDDEG
SMMDFESSGGMHLEEGESAGGIKSSRESLGALRGECLSLEEEEEAGEVNKGERDAMDEVA
AEAKEFTESVYSNLEIGPVEDCTLLFGRGEMDLSIVGSGTERDRRKTNESGPETKEQNPE
VPERQGTFEKIHGNIGSFTDEDISLKYLVRYLCSSFLLSGHVGSVIPDKTIRVSVKVLAL
NCVAAASSLVPNVMGETLFIGAEGDIELQQHVDDVLRYHSHTDPQLGASVALLAGHFVQA
NLIHGGGQYFDLGRPALTLGALLDILCQLLGNESSVTVRGAVAGLRLCLPELLLSQNATA
VAKTLPHLVRAANNQYWLVKVEVAELVSSLNLSCLDHIEASNTGPMNASIGRHKQFSHRV
VPDVLMHLLIDQDQRVRAAAAAAIVRMIPELMSEGDLVMKIACKLVTSGHIRSSKAFVSS
YQEPSRGLPSPPVPPFDKLLRGEGGKDWRDGSVSASLSRMVHLLTGLLVKTDNKYSMLGA
LEALAQLSEAYSPVLYPHAWSCQVHSSITHTSDGNLQVGLLTLILNVMSESVLSGDLAAQ
QNILVILGNLLSGIAMDATRSCEEAAMTQKHPWPMFSSVQMKAVADAVVEHVLRVLSIYV
HIVEDVTPGTKPPIAPLAPQSALSPNKRKSRAETLGEKTRSSSPGKGEKTDGEDREKKVA
KSGGLGNFSHLPEYIKLYDVVKNAYKIYRISLDDNTTDRLCGVLKAALLSLSRILEVASM
NEFGRLADELLQYLKAVTVYLPTLTIHTGQQLLKCLFGSNISATWHLLSKSTSSVSTLSR
QDRDSTCHQGYSLHHICLMRPFAELEKDIKQGAEGQVESDTIGLYSDTLSSSLTQRKGSS
NIFKMIGRNSDKSSLSSYIRLFEPLVIKALKLYTVSSDVVMQRAVLQLLIHLVQIRVNYC
LLDSDQIFIGYVIKQFEYIEEGQIKCAEELIPAMFGFMVLLSYERYHSKSIIGVPKIMQL
CDGLMASGQPPLSHCVGALQPLVEDLFLDRSTSGANDQKELDTQREVLSSMLLRLAHYHQ
VLQLLSLILKTTRDTNKERWRKLSRQVIDVTLPLLSRLQVNLDCEDSLASVAEVLNAVCP
SVYRPVDCVLKALFTSPCELESTVSVERWIGCILLLIRVLITHSTQELVLARLEELGLSM
EFVRNDTPGSGIDGSKENLASPQEGGKASSSAGTTFRDPLNVTQPETQPSVAMARFLLEV
VRVSVAELQSVVMAALHSSHPPDFLHHLSYHILLVLAQLAQAGQWKEVTGAIKDICMNEP
DLVEEINEALLFVAGRFPTLTLLWCQLMTSLDQTSQSLWTQVLRTSQRKSVTTLSPPANE
NSGPSSCLTLELLRRCGILLFANFVMRHMQEGEWLTWLVVQHISDVVMLHKEPPVASLLR
TIHASSAASALLIQAIHARCNLIHKAEYGGHIVSLVAGVHVSQSGALVTLLVERLLGSPH
LVVARAACSLATHRMHLLLAMPPPQVMTQMPSDDLTKILSNMKMKALDKKYGQLYSMLQR
LLNQVHEKNHTATPGEQPIAPTSAKLDLNWYFQLVNNRCSIGEGGGGEECSRLLGPLEYS
EIINIMSAKTFNTALLAHTLRYGLSTTLQANNNWGECNSSVETGDSEESSSSGSSSGGEA
PLYTASKVVLLQHIGHIGSTVPRPHHVFIPGGGNKYSEKLSKMFSSADMSDAVLRLTPAL
LEYLMSFTRLPWRTDVHPDSMEHVLKFALLVMELLHWKIWQGNCSIETLCQSLQCVDLVL
RSSSLAGLMGLPDRVSYVCSMVASIHATISYLLKPKFLPSVCASLSERLAGLDSSPLTAC
HRLVQLVVWLEAGGLAALPACVAHPVKNAICGLGRMPVVNSVVRTPTDLWSLGWSPEMAG
DHGTTLPPLPVELLQETDVLKQFVFRVQLFGWTGRQQFEETWMAFLSVLNATPNEDTLPE
ELPYINLGLTLAVRGITALLVQTLLLPVPGNPHSGKLLRIPRDKAPQYMATKVGRKLRDV
MSKLQDKLQQVNHLVKGYPHSSLLHLTSFPSSSTNPMSSQGSYRYQLGQVSVEYMVTALT
AHDDPPESPENPSHNGCYEFEQRERQLASCGLDVQSCLHFLHYHFSSWLKPQSGLCASVI
AEVVKSVACLCDLFTSTAHHEWVLDCLLPLHGSHPPEDHITTQYIILATSKALATLRLAK
KDVSSVVSDGVARVVDTGLKSGQISVRTCALQGLLYLLQGPPEHSPPLINLAANYILKYY
NDGKSQECESHEIAVWELWVYLVEHYESLPDPTLPSTALHMALSAAATTTTSPNILRQVL
QGVERLVLVQQISNNTVEVILKLVMDLVLNGPPSVSLTALPLFITALYASVQTDPYGHQV
GQDEMASDPETLLQVMEKMSIFFDRIRVGYPYEAEVIAGLVGQCILDVLPASQILNKVIT
EYISSHQPHPHLLASTLFQVFEGAVGESGEEGIVQEWVLLSLSNFTQRTPVALAVWCLTC
FFIAASCNRWLRAAFPCVQARLGKLDARDRQIFCLAATHFRQSLAREEQRVKFDAVFQAV
AIPGSPFHELLSCIEQQ
NT seq
8874 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctggagaagctagtgcgagcctttgaggctgttaaagtctcacaaggtgtt
ggcaatggcggaaagggtggtggtggtggtggaggtcgtgttggcacttcagggatgtca
aatgcaggactcaaggtgggtttggcagatagaccaatggaacatacaagtgcaatggct
tccctagcagcaacaatatcgcagcaaggacaaggtttattgagtaagcgggatttggta
ttaaatagtcgtgacaaagtagctcactgtgatgtaataggggatgcattagttggagca
aaaagtggcgatattcaaaagatgctgacagtgggtatggaaaccttgctcctgctactg
gacgatgatgaccctgatgttcggatgaatgctgatgaagccctgaatagagttgtcagg
ggtttaagtgaaactcatcttggtaagattcaagtcgaactttacaaagaaataaagaaa
aatggtcctgtgcgaagcttgagagcagctctaaatcgatttgcagttttatgtcaccac
attagacctcagaaatgtagagcatatgtgcagaatctcttgccctgcctcatccgcatg
gctagacgacaagaagaacctcttctagagacactggcatcttctcttgacaaaattctt
cctactcttggacacttcaccaatgataatgagatcaaaaaccttttgaaagcattctta
cccaacctaagtcactcctcagctgcagttcggcgcacggctgtcacgtctttaattgca
ctatgccgatactctcgcaaaccttccatgtttttcttgtggctgctgaacaccacccta
cagctcctgatccccattcaagaggacataagtgttagcttggtgctcgggtgtttcctt
tgtatccgtatgttattgccacacttggttccgctaacatgccagcctagtccactagat
ccaagcagtagaggtgtgtcaaatatgaacattgaaaatattgtatctgtggatcagatg
ttacaggtttatgaactttgtatacattacagtgggcacaaggatcataacattgtaact
agtagcttagaagctctacaggctttacttcaaagtcctccagcttcacttcttatgcac
attaccaatccagaaggaataacaagatctagaatatttgctgatccaagagcaagcaaa
ctctcttcaagagcaccaagtcagatcagcataacaccctctttgtatgacgatgagggt
tccatgatggactttgaaagtagtggaggaatgcaccttgaggaaggggaaagtgctggg
gggataaagtccagcagagaaagccttggggcacttcgaggagaatgtcttagtttggaa
gaagaggaagaagctggagaagtgaataaaggggaaagagatgccatggatgaagtggct
gcagaagccaaagaattcacagaaagtgtttactccaacctggaaattggaccagtagaa
gattgcactctactctttggaagaggagagatggatctatcaatagttggctcaggaacg
gagcgtgaccgaagaaagacgaatgaatctggtcctgaaaccaaagaacaaaaccctgaa
gtgccagagagacaaggaacatttgaaaagatccatgggaacattggttcctttacagat
gaagacatttcgctcaaatatcttgtccgctatctctgttcatcattcctcctgtcgggt
catgtaggatcagtgattcctgataaaactatccgagtgagtgtcaaagttttagcacta
aactgtgtggctgctgcttcaagtttagtgcccaatgttatgggagagacactcttcatt
ggtgctgagggcgacattgaacttcagcagcatgtggatgatgtcctgcgctaccatagt
cacacagatccacaactgggtgctagtgttgccttgcttgctggccactttgtccaggcg
aatctcatccatgggggaggccaatactttgatcttggaagacctgcactaactcttgga
gcattacttgatattttatgtcagttgctgggcaacgagtcaagtgtgacagtacgagga
gcagtggcgggtctgcggttgtgtttacctgaattgttactctcccaaaatgcaacagct
gttgctaagactcttcctcatctagtcagagctgccaataatcaatactggctagtcaaa
gttgaagtggcagaacttgtgtcaagtttgaacttgagttgtcttgaccatattgaagca
agcaatactggacctatgaatgcatcaatagggcggcacaaacagttttcacatagggtt
gtccctgatgtactcatgcatcttctgatagaccaagaccagagagtaagagcagcagct
gcagcagccattgttagaatgattccagaacttatgagtgagggtgatctggtcatgaaa
attgcttgcaagctggtcacctctggtcacattcggtccagcaaggcctttgtatcaagt
tatcaggaaccttcgcgaggtcttccgtcgccacctgtgcctccatttgataaactactt
cgaggtgagggaggaaaggattggagagatggaagtgtgtcagcaagtctctctaggatg
gtacatctcctgacaggtctcttggtgaaaacggacaataaatactcaatgcttggagca
ttagaggcactggctcagcttagtgaagcctattcaccagtgctctatccacatgcatgg
tcctgccaagtacattcaagtattactcacaccagtgacgggaacctccaagttggtctc
cttactctgatactgaatgttatgagtgaatctgttctttcgggagacttagctgcacag
caaaacattcttgtcatccttggtaatcttctctcaggcattgccatggatgccaccaga
agctgtgaagaagccgcaatgactcagaagcacccgtggccaatgttttcgtcagtacag
atgaaagcagtggctgacgctgttgttgagcatgtgttgagggtgttgagtatttatgtt
cacattgttgaagatgttactcctggaactaagcctcccatagctcctcttgcaccccaa
agtgcattgtctcctaataagagaaagagtcgagcagagactttgggagagaaaacaagg
tccagttccccaggaaaaggggagaaaacagatggcgaggatcgtgagaagaaagtagca
aaatcaggaggacttggaaatttttctcatcttccagaatatatcaagttatatgatgta
gtaaagaatgcatataaaatatataggatatctcttgatgataatactacggacagactc
tgtggtgttttaaaggctgccttgctaagcttgagcaggattctggaagtagcatcaatg
aatgaatttggaagattggctgacgaacttctacagtacctgaaggctgtgactgtatat
ttgccaaccttgacgattcacacagggcagcagttactcaaatgcctttttggctccaac
atctctgcaacatggcatctcctgagcaagtccacaagctccgtgtccaccctcagtcga
caggacagagacagcacctgccaccagggttatagtttacatcacatctgccttatgagg
ccttttgctgaactggagaaggacatcaagcagggggctgaaggccaggttgaaagcgac
accatagggttgtacagtgataccttaagttcgagtttaacacagcggaaggggagctca
aatatctttaagatgattggaagaaacagtgacaagagctcccttagttcatatattcgc
ttatttgaaccacttgtcatcaaagctttaaagttgtacactgtatctagtgatgtggtc
atgcagagagcagttcttcagttgctgattcatcttgttcaaatcagagtcaactactgt
ttgctcgactctgaccaaatattcatcggttatgtcattaagcagtttgaatatattgaa
gaaggtcagataaagtgtgcagaggagctgatcccagccatgtttgggtttatggtgctt
ctttcatatgaacgctaccatagcaagagtatcattggagtgccgaagatcatgcagctc
tgtgatggcctcatggccagtgggcagcctccactgtctcattgtgttggagcgctgcaa
cctctagtcgaagacttattccttgatcgtagcacttcgggagccaatgatcaaaaggaa
cttgatactcagagggaagtgttgagctcaatgcttctccgattagctcattaccatcag
gttttgcagcttctctctctcatattaaagacaactcgagacacaaacaaagagcgatgg
aggaagttatctcgccaagtcattgatgtgactctaccactgctttcgaggttacaagtt
aatttggattgtgaggattctctggcttcagtggctgaggttttgaacgccgtatgtccg
agtgtatacagacctgttgactgtgtcctcaaagctcttttcacttctccttgtgaattg
gaaagtactgtcagtgttgagaggtggataggatgcatccttctgttaatacgagtactt
attactcactctactcaagaattggttttagcaagattagaggaacttgggttgagtatg
gagtttgtacggaatgacactccaggcagtggcatagatggaagtaaggagaacttggca
tcccctcaggaaggagggaaagcatcctccagtgcaggaaccacattccgagatcctttg
aatgttactcagccagagacccagccctctgtggctatggccaggtttttgttagaagtg
gtcagagtaagtgtggcagaactacaaagtgtggtgatggctgccctacattctagtcat
cctccagatttccttcatcacctttcataccacattcttctagttttggctcagttggcc
caagcaggtcaatggaaagaagtaacaggtgccatcaaggatatctgcatgaacgagcct
gatcttgtcgaagaaatcaacgaagccctgctctttgttgcgggaaggtttccaacactt
accctcctttggtgtcaactaatgacctcactagaccaaacgtcacaaagcctttggacc
caggtgcttagaacttcacagcgtaaatctgttacaaccttaagtcctcctgccaatgag
aacagtggcccttccagctgcctgactttagagctcttaaggagatgtgggattctccta
tttgccaactttgtgatgcgtcacatgcaggagggagagtggttgacgtggttagtggta
cagcacatcagcgatgttgttatgttacacaaggagcctccagtagcctcactcctgaga
accattcatgcatcatctgctgcttcagctcttctcatccaggctattcatgctcgttgt
aatcttatacataaggctgaatatggaggccacattgtgtcacttgtggcaggagtacat
gtgtcacaatcaggagctcttgtgacactactggttgaacgtctactgggctcacctcat
ctagtggtagcaagagcagcttgttcgctggccacccaccgcatgcacctcctcctggcc
atgcccccaccacaggtcatgactcaaatgccttctgatgatctcaccaaaatccttagt
aacatgaaaatgaaagctcttgacaaaaagtatggacaactgtacagtatgctccaacgc
cttctcaaccaagttcacgagaagaaccacacagccacaccaggagagcagcccattgct
ccaactagtgccaagcttgatctcaactggtattttcagcttgttaataatagatgcagt
attggagaaggaggtggaggggaggaatgttcaagactgcttggtcccctagagtatagc
gaaatcatcaacatcatgtcagccaagaccttcaacactgcacttcttgctcatacactg
agatatggcctcagcacaacattgcaggctaacaacaattggggagagtgcaacagttca
gtggaaacgggagatagtgaagagtctagcagtagtgggagcagctcagggggtgaggcg
cccttgtacacagccagcaaagtggttcttcttcagcatattggtcacattggttccaca
gtccccagaccacatcatgtcttcattccaggtggtgggaacaagtatagtgaaaagctt
agcaagatgttcagcagtgctgatatgagtgatgctgtgttaaggttaacccctgctctg
cttgagtacctgatgtccttcacacgtctgccgtggagaacagatgttcatccggattca
atggaacatgttcttaaatttgctctcctcgtgatggagttgctacattggaagatctgg
cagggaaactgcagcattgagacgctgtgtcaaagcctgcagtgtgttgacttggtcctg
cgcagtagttcacttgcagggttgatgggactgccggatcgggtgtcatatgtctgctct
atggttgcctctattcatgcaacaatctcatacctactcaagccaaagtttttgccaagt
gtatgtgcatctttgagtgagcggttagctggacttgacagctcaccgttgactgcctgt
caccgtcttgtacaacttgtcgtgtggttagaagctggaggacttgcagcacttccagcc
tgtgtagctcatcctgtgaaaaatgcgatctgtggccttggacgcatgccagtggtcaat
agtgtggtaagaacacccacggatctgtggtctcttgggtggtcaccagagatggctgga
gaccatggcactacactaccacctctgcctgtagagttgcttcaggaaacagatgtcttg
aagcaatttgtttttagggtacaactgtttggatggacggggagacagcaattcgaggaa
acttggatggctttcctctcagtcctcaatgcaactccaaatgaagacacgttacctgaa
gaattgccatatatcaatttaggattaacacttgctgtaagaggaattacagctcttctg
gtacaaactctgttgctgccagttccagggaatccccacagtggcaaactattaaggatt
ccaagagacaaagctcctcagtatatggccaccaaagttggccgaaagttgagagacgtc
atgtccaagttgcaagacaagctgcaacaagtaaaccatttggtgaaagggtaccctcat
tcaagtcttctacaccttacctccttcccttcttcttccacaaatcctatgtcctcccaa
ggatcctacagataccaacttggtcaggtgtctgttgagtacatggtaacagctctcact
gcccatgatgacccaccggagtctccagagaacccatctcacaatggttgttatgagttt
gagcagcgagagagacaattagcaagttgtgggcttgatgtacaatcttgtcttcacttt
ctccactatcatttttcttcatggcttaaaccacagagtggcttgtgtgcctcagtcatt
gccgaagttgtcaagtcagttgcatgtttatgtgacctctttacatcaactgcacatcat
gaatgggttcttgactgtttgctacccctccatggctctcatcctcctgaagaccacatt
accacccagtatataatactggccacaagcaaagctttagccacattacgtcttgccaaa
aaagatgtgagttctgtcgtcagtgatggtgtggctcgtgtggttgacactggactgaag
agtggccagatctctgtgagaacttgtgctcttcaggggcttctatacctccttcaggga
cctcctgaacacagccctcctcttattaatcttgcagccaattatatacttaaatactat
aatgatgggaagagtcaagagtgtgagagtcatgaaatagctgtatgggagttgtgggtt
tatttagtagagcactacgagtcactcccagacccaactttgccctccactgcacttcac
atggctctctctgctgcagcaacaaccaccacctcacccaacatacttcgccaggtctta
cagggagtggagcggcttgttttggtgcagcagatatccaataacacggtggaagtcatc
ctgaagctggttatggacctagtcttaaatggacccccctctgtctcccttacagctttg
cctctctttatcacagccctctatgcaagtgtacagactgatccatatgggcatcaagtt
ggccaggatgaaatggcgtctgaccctgagactttacttcaagttatggagaagatgtca
atattttttgataggatccgtgttggctatccctatgaagcagaggttattgcaggtctg
gtgggtcagtgtatattagatgtgctaccagcaagccaaatcctgaacaaagttatcaca
gaatacatatccagtcatcagccacatccacacctccttgcttccactctcttccaggtg
tttgaaggtgctgttggggagagtggtgaggaaggaattgtgcaagaatgggttctgctc
tcgcttagcaattttacccaaagaacaccggtggcacttgccgtgtggtgcctcacctgc
ttcttcattgcagcatcctgtaacagatggctgagagcagcatttccctgtgttcaagca
cgcttgggtaaattagatgcaagagatcgacagatattttgtctagcagcaacgcatttc
cgacaaagtcttgcaagggaggaacagcgtgtcaagtttgatgcagtgttccaggctgtg
gctattccaggttctccatttcatgagctgctgtcatgcattgaacagcaatag
DBGET
integrated database retrieval system
